Construct: shRNA TRCN0000196139
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_172148.1-418s1c1
- DNA Barcode:
- GCACTTCGCTACTAAAGGTCT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- B9d2 (232987)
- Gene Description:
- B9 protein domain 2
- Transcript:
- RefSeq NM_172148.1 (CURRENT)
- Match location:
- Position 418 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000196139)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCACTTCGCTACTAAAGGTCT
- Hairpin Sequence:
-
5'-CCGG-GCACTTCGCTACTAAAGGTCT-CTCGAG-AGACCTTTAGTAGCGAAGTGC-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCACTTCGCTACTAAAGGTCTCTCGAGAGACCTTTAGTAGCGAAGTGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCACTTCGCTACTAAAGGTCTCTCGAGAGACCTTTAGTAGCGAAGTGC-3'
Other clones with same target sequence:
(none)
