Construct: shRNA TRCN0000216188
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_026138.2-3545s1c1
- DNA Barcode:
- CTCATCTTACACTGTCAAATT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Soga3 (67412)
- Gene Description:
- SOGA family member 3
- Transcript:
- RefSeq NM_026138.2 (CURRENT)
- Match location:
- Position 3545 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000216188)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CTCATCTTACACTGTCAAATT
- Hairpin Sequence:
-
5'-CCGG-CTCATCTTACACTGTCAAATT-CTCGAG-AATTTGACAGTGTAAGATGAG-TTTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCTCATCTTACACTGTCAAATTCTCGAGAATTTGACAGTGTAAGATGAGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACTCATCTTACACTGTCAAATTCTCGAGAATTTGACAGTGTAAGATGAG-3'
Other clones with same target sequence:
(none)
