Construct: ORF TRCN0000465573

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016213.1_s317c1
Derived from:
ccsbBroadEn_12802
DNA Barcode:
TCTGCAGTTCTGCTGTCACCGCTA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ING5 (84289)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000465573
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84289 ING5 inhibitor of growth family ... NM_001330162.2 100% 100%
2 human 84289 ING5 inhibitor of growth family ... NM_032329.6 94.1% 94.1% 679_720del
3 human 84289 ING5 inhibitor of growth family ... XM_017005102.2 78.5% 72.1% (many diffs)
4 human 84289 ING5 inhibitor of growth family ... XM_017005098.1 77% 74.4% (many diffs)
5 human 84289 ING5 inhibitor of growth family ... XM_017005099.1 77% 74.4% (many diffs)
6 human 84289 ING5 inhibitor of growth family ... XM_017005101.1 74.3% 67.2% (many diffs)
7 human 84289 ING5 inhibitor of growth family ... XM_017005097.1 73.4% 71% (many diffs)
8 human 84289 ING5 inhibitor of growth family ... NM_001330161.2 72% 56.1% (many diffs)
9 human 84289 ING5 inhibitor of growth family ... XR_002959351.1 11.6% (many diffs)
10 human 84289 ING5 inhibitor of growth family ... XR_427115.4 10% 1_20del;502_2086del;2284_6778del
11 human 84289 ING5 inhibitor of growth family ... XR_001738993.2 8.9% (many diffs)
12 mouse 66262 Ing5 inhibitor of growth family,... NM_025454.2 83% 88.7% (many diffs)
13 mouse 66262 Ing5 inhibitor of growth family,... XM_006529792.3 82.6% 87.9% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
744
ORF length:
678
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc gaccgccatg tacttggagc actatctgga cagtatcgag aaccttccct
121gcgaacttca gaggaacttc cagctgatgc gagagctgga ccagaggacg gaagataaga
181aagcagagat tgacatcctg gctgcagagt acatctccac ggtgaagacg ctgtctccag
241accagcgcgt ggagcgcctg cagaagatcc agaacgccta cagcaagtgc aaggaataca
301gtgacgacaa agtgcagctg gccatgcaga ccTACGAGAT GGTGGATAAA CACATTCGAA
361GGCTTGATGC AGACCTGGCG CGCTTTGAAG CAGATCTGAA GGACAAGATG GAGGGCAGTG
421ATTTTGAAAG CTCCGGAGGG CGAGGGTTAA AAAAAGGCCG GGGTCAGAAA GAAAAAAGAG
481GGTCCCGGGG CCGAGGCAGG AGGACATCAG AGGAAGACAC ACCAAAGAAA AAGAAGCACA
541AAGGAGGGTC TGAGTTCACT GACACCATCC TGTCCGTGCA CCCCTCTGAT GTGCTGGACA
601TGCCCGTGGA CCCAAACGAA CCCACGTACT GCCTGTGCCA CCAGGTCTCC TATGGGGAGA
661TGATTGGCTG TGACAATCCA GACTGTCCAA TTGAGTGGTT TCACTTTGCC TGCGTGGACC
721TTACCACGAA ACCCAAAGGA AAATGCCCAA CTTTCTTGTA CAAAGTGGTT GATATCGGTA
781AGCCTATCCC TAACCCTCTC CTCGGTCTCG ATTCTACGTA GTAATGAACT AGTCCGTAAC
841TTGAAAGTAT TTCGATTTCT TGGCTTTATA TATCTTGTGG AAAGGACGAT CTGCAGTTCT
901GCTGTCACCG CTAACGCGTT AAGTCgacaa tcaacctctg gattacaaaa tttgtgaaag
961att

Download FASTA (ORF) (Full)