Construct: ORF TRCN0000466213

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008876.1_s317c1
Derived from:
ccsbBroadEn_04911
DNA Barcode:
TTGAAGAAATGTACTAGGCACCAT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM71 (137835)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000466213
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 137835 TMEM71 transmembrane protein 71 NM_144649.3 100% 100%
2 human 137835 TMEM71 transmembrane protein 71 NM_001364885.2 93.2% 93.2% 313_369del;486_487insGCA
3 human 137835 TMEM71 transmembrane protein 71 NM_001145153.2 72.2% 72.2% 313_369del;486_487ins189
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
894
ORF length:
828
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgta ccgaatatct caactgatgt caacaccagt agcaagttct tccaggttgg
121aaagagaata tgctggagag ctgtctccca cgtgcatttt cccaagtttc acctgtgatt
181ccctggatgg ttaccattct tttgaatgcg gctccataga tcccctgaca ggctcccact
241atacctgtcg ccgaagtccc agactcctca ccaatggcta ctatatttgg actgaagaca
301gcttcctgtg cgacaaagat ggcaacataa ctctgaaccc atcccagacc agcgttatgt
361ataaggagaa cttagttagt acctccaaat cttggctgca tggaagtatc tttggtgaca
421tcaactcttc tccaagtgaa gacaactggt tgaaggggac caggaggttg gacacagacc
481attgcaatgg aaatgcagat gatttagact gttcttctct gactgatgac tgggagtcag
541ggaagatgaa tgcagagtct gtgatcacct cctcttccag ccacatcata tctcagccTC
601CTGGAGGAAA CTCCCATAGC TTGTCTCTTC AGTCCCAGTT GACAGCTTCT GAACGTTTCC
661AAGAGAATAG TTCGGATCAT TCAGAAACCA GGTTGTTGCA AGAGGTCTTC TTTCAGGCAA
721TCCTGCTTGC TGTGTGCTTA ATCATTTCTG CATGTGCAAG ATGGTTTATG GGAGAAATAT
781TAGCCAGTGT CTTCACATGC TCATTGATGA TAACTGTAGC TTATGTGAAA TCATTGTTTC
841TCAGCCTTGC CAGCTATTTC AAAACCACTG CCTGTGCTCG GTTTGTCAAA ATTTGCCCAA
901CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
961ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
1021TATCTTGTGG AAAGGACGAT TGAAGAAATG TACTAGGCAC CATACGCGTT AAGTCgacaa
1081tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)