Construct: ORF TRCN0000466407

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006858.1_s317c1
Derived from:
ccsbBroadEn_06233
DNA Barcode:
CACCGCCTGACGTTCTTTGTTAAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FYB1 (2533)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000466407
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2533 FYB1 FYN binding protein 1 NM_001349333.2 99.9% 99.8% 2152G>T
2 human 2533 FYB1 FYN binding protein 1 NM_001465.6 99.9% 99.8% 2152G>T
3 human 2533 FYB1 FYN binding protein 1 XM_006714464.3 99.9% 99.8% 2152G>T
4 human 2533 FYB1 FYN binding protein 1 XM_006714466.2 99.9% 99.8% 2152G>T
5 human 2533 FYB1 FYN binding protein 1 XM_011514009.1 99.9% 99.8% 2152G>T
6 human 2533 FYB1 FYN binding protein 1 XM_011514010.1 99.9% 99.8% 2152G>T
7 human 2533 FYB1 FYN binding protein 1 NM_001243093.2 98.7% 98.6% 1_30del;2182G>T
8 human 2533 FYB1 FYN binding protein 1 XM_011514008.3 98.7% 98.6% 1_30del;2182G>T
9 human 2533 FYB1 FYN binding protein 1 NM_199335.5 94.4% 94.3% 1907_1908ins138;2014G>T
10 human 2533 FYB1 FYN binding protein 1 NM_018594.2 93.2% 93.2% 1_30del;1937_1938ins138;2044G>T
11 human 2533 FYB1 FYN binding protein 1 XM_011514011.2 93.2% 93.2% 1_30del;1937_1938ins138;2044G>T
12 human 2533 FYB1 FYN binding protein 1 XM_011514012.3 81.2% 81.2% 1_30del;2076_2076delGins442
13 human 2533 FYB1 FYN binding protein 1 XM_011514013.3 58.9% 57.6% (many diffs)
14 mouse 23880 Fyb FYN binding protein XM_006519986.1 39.4% 39.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2556
ORF length:
2487
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggcgaaatat aacacggggg gcaacccgac agaggatgtc tcagtcaata
121gccgaccctt cagagtcaca gggccaaact catcttcagg aatacaagca agaaagaact
181tattcaacaa ccaaggaaat gccagccctc ctgcaggacc cagcaatgta cctaagtttg
241ggtccccaaa gccacctgtg gcagtcaaac cttcttctga ggaaaagcct gacaaggaac
301ccaagccccc gtttctaaag cccactggag caggccaaag attcggaaca ccagccagct
361tgaccaccag agaccccgag gcgaaagtgg gatttctgaa acctgtaggc cccaagccca
421tcaacttgcc caaagaagat tccaaaccta catttccctg gcctcctgga aacaagccat
481ctcttcacag tgtaaaccaa gaccatgact taaagccact aggcccgaaa tctgggccta
541ctcctccaac ctcagaaaat gaacagaagc aagcgtttcc caaattgact ggggttaaag
601ggaaatttat gtcagcatca caagatcttg aacccaagcc cctcttcccc aaacccgcct
661ttggccagaa gccgccccta agtaccgaga actcccatga agacgaaagc cccatgaaga
721atgtgtcttc atcaaaaggg tccccagctc ccctgggagt caggtccaaa agcggccctt
781taaaaccagc aagggaagac tcagaaaata aagaccatgc aggggagatt tcaagtttgc
841cctttcctgg agtggttttg aaacctgctg cgagcagggg aggcccaggt ctctccaaaa
901atggtgaaga aaaaaaggaa gataggaaga tagatgctgc taagaacacc ttccagagca
961aaataaatca ggaagagttg gcctcaggga ctcctcctgc caggttccct aaggcccctt
1021ctaagctgac agtggggggg ccatggggcc aaagtcagga aaaggaaaag ggagacaaga
1081attcagccac cccgaaacag aagccattgc ctcccttgtt taccttgggt ccacctccac
1141caaaacccaa cagaccacca aatgttgacc tgacgaaatt ccacaaaacc tcttctggaa
1201acagtactag caaaggccag acgtcttact caacaacttc cctgccacca cctccaccat
1261cccatccggc cagccaacca ccattgccag catctcaccc atcacaacca ccagtcccaa
1321gcctacctcc cagaaacatt aaacctccgt ttgacctaaa aagccctgtc aatgaagaca
1381atcaagatgg tgtcacgcac tctgatggtg ctggaaatct agatgaggaa caagacagtg
1441aaggagaaac atatgaagac atagaagcat ccaaagaaag agagaagaaa agggaaaagg
1501aagaaaagaa gaggttagag ctggagaaaa aggaacagaa agagaaagaa aagaaagaac
1561aagaaataaa gaagaaattt aaactaacag gccctattca agtcatccat cttgcaaaag
1621cttgttgtga tgtcaaagga ggaaagaatg aactgagctt caagcaagga gagcaaattg
1681aaatcatccg catcacagac aacccagaag gaaaatggtt gggcagaaca gcaaggggtt
1741catatggcta tattaaaaca actgctgtag agattgacta tgattctttg aaactgaaaa
1801aagactctct tggtgcccct tcaagaccta ttgaagatga ccaagaagta tatgatgatg
1861ttgcagagca ggatgatatt agcagccaca gtcagagtgg aagtggaggg atattccctc
1921caccaccaga tgatgacatt tatgatggga ttgaagagga agatgctgat gatggctcca
1981cactacaggt tcaagagaag agtaatacgt ggtcctgggg gattttgaag atgttaaagg
2041gaaaagatga cagaaagaaa agtatacgag agaaacctaa agtctctgac tcagacaata
2101atgaaggttc atctttccct gctcctccta aacaattgga catgggagat gaagtttacg
2161atgatgtgga taccTCTGAT TTCCCTGTTT CATCAGCAGA GATGAGTCAA GGAACTAATT
2221TTGGAAAAGC TAAGACAGAA GAAAAGGACC TTAAGAAGCT AAAAAAGCAG GAAAAAGAAG
2281AAAAAGACTT CAGGAAAAAA TTTAAATATG ATGGTGAAAT TAGAGTCCTA TATTCAACTA
2341AAGTTACAAC TTCCATAACT TCTAAAAAGT GGGGAACCAG AGATCTACAG GTAAAACCTG
2401GTGAATCTCT AGAAGTTATA CAAACCACAG ATGACACAAA AGTTCTCTGC AGAAATGAAG
2461AAGGGAAATA TGGTTATGTC CTTCGGAGTT ACCTAGCGGA CAATGATGGA GAGATCTATG
2521ATGATATTGC TGATGGCTGC ATCTATGACA ATGACTTGCC AACTTTCTTG TACAAAGTGG
2581TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
2641CTAGTCCGTA ACTTGAAAGT ATTTCGATTT CTTGGCTTTA TATATCTTGT GGAAAGGACG
2701ACACCGCCTG ACGTTCTTTG TTAACACGCG TTAAGTCgac aatcaacctc tggattacaa
2761aatttgtgaa agatt

Download FASTA (ORF) (Full)