Construct: ORF TRCN0000466665
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF000337.1_s317c1
- Derived from:
- ccsbBroadEn_05250
- DNA Barcode:
- CTGTCATACTGTACAAAATCCGGC
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- LRRN4CL (221091)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000466665
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 221091 | LRRN4CL | LRRN4 C-terminal like | NM_203422.4 | 100% | 100% |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 780
- ORF length:
- 714
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 ttggcatgct gggctctccc tgccttctgt ggctcctggc cgtgaccttc ttggttccca 121 gagctcagcc cttggcccct caagactttg aagaagagga ggcagatgag actgagacgg 181 cgtggccgcc tttgccggct gtcccctgcg actacgacca ctgccgacac ctgcaggtgc 241 cctgcaagga gctacagagg gtcgggccgg cggcctgcct gtgcccagga ctctccagcc 301 ccgcccagcc gcccgacccg ccgcgcatgg gagaagtgcg cattgcggcc gaagagggcc 361 gcgcagtggt ccactggtgt gcccccttct ccccggTCCT CCACTACTGG CTGCTGCTTT 421 GGGACGGCAG CGAGGCTGCG CAGAAGGGGC CCCCGCTGAA CGCTACGGTC CGCAGAGCCG 481 AACTGAAGGG GCTGAAGCCA GGGGGCATTT ATGTCGTTTG CGTAGTGGCC GCTAACGAGG 541 CCGGGGCAAG CCGCGTGCCC CAGGCTGGAG GAGAGGGCCT CGAGGGGGCC GACATCCCTG 601 CCTTCGGGCC TTGCAGCCGC CTTGCGGTGC CGCCCAACCC CCGCACTCTG GTCCACGCGG 661 CCGTCGGGGT GGGCACGGCC CTGGCCCTGC TAAGCTGTGC CGCCCTGGTG TGGCACTTCT 721 GCCTGCGCGA TCGCTGGGGC TGCCCGCGCC GAGCCGCCGC CCGAGCCGCA GGGGCGCTCT 781 GCCCAACTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG 841 GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC 901 TTTATATATC TTGTGGAAAG GACGACTGTC ATACTGTACA AAATCCGGCA CGCGTTAAGT 961 Cgacaatcaa cctctggatt acaaaatttg tgaaagatt