Construct: ORF TRCN0000467120

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011456.1_s317c1
Derived from:
ccsbBroadEn_04545
DNA Barcode:
TAATGTATCAATGAGGATACCAAA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FAAP24 (91442)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000467120
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 91442 FAAP24 FA core complex associated ... NM_152266.5 100% 100%
2 human 91442 FAAP24 FA core complex associated ... XM_005259393.3 80% 72.1% 0_1ins71;33_34ins58
3 human 91442 FAAP24 FA core complex associated ... NM_001300978.2 55.8% 55.8% 0_1ins285
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
711
ORF length:
645
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga aaagaacccc cctgatgata cgggccccgt gcacgtgcct ttggggcata
121ttgtggccaa tgagaaatgg cgcgggtcac agctggcgca ggagatgcaa gggaaaatta
181agctcatttt cgaggatggc ttgacaccag acttttatct gtcgaacaga tgctgcattc
241tttatgtcac cgaagctgat ttggtggcag gaaatggcta cagaaagagg cttgttcggg
301ttagaaattc caataatctt aaaggaattG TAGTCGTTGA AAAAACCCGG ATGAGTGAAC
361AATACTTCCC AGCCCTACAG AAGTTTACTG TGCTGGACCT TGGAATGGTG CTGCTTCCAG
421TGGCCAGCCA GATGGAAGCA TCCTGCCTCG TCATCCAGTT GGTTCAAGAG CAAACCAAAG
481AGCCCAGTAA GAACCCTCTT CTCGGGAAGA AACGGGCCCT GCTGCTGTCT GAGCCTTCGC
541TCCTTCGAAC CGTGCAGCAG ATCCCAGGAG TTGGAAAAGT TAAAGCTCCC CTTCTCCTCC
601AGAAGTTTCC AAGCATCCAG CAACTGAGTA ATGCTTCCAT TGGGGAACTG GAGCAGGTGG
661TCGGACAAGC AGTGGCACAG CAGATCCATG CCTTCTTCAC GCAGCCCAGG TGCCCAACTT
721TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
781CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
841CTTGTGGAAA GGACGATAAT GTATCAATGA GGATACCAAA ACGCGTTAAG TCgacaatca
901acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)