Construct: ORF TRCN0000467215
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF008757.1_s317c1
- Derived from:
- ccsbBroadEn_05784
- DNA Barcode:
- GAGACTAACTGAGTCTGTATGGGC
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- ADPRH (141)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000467215
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 141 | ADPRH | ADP-ribosylarginine hydrolase | NM_001125.4 | 99.9% | 100% | 546T>A |
| 2 | human | 141 | ADPRH | ADP-ribosylarginine hydrolase | NM_001291949.2 | 99.9% | 100% | 546T>A |
| 3 | human | 141 | ADPRH | ADP-ribosylarginine hydrolase | NM_001371092.1 | 99.9% | 100% | 546T>A |
| 4 | human | 141 | ADPRH | ADP-ribosylarginine hydrolase | NM_001291950.2 | 69.9% | 70% | 0_1ins321;225T>A |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 1137
- ORF length:
- 1071
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 ttggcatgga gaagtatgtg gctgctatgg tgctgagtgc agctggagat gccctggggt 121 actacaatgg gaagtgggag ttcctccagg atggggagaa gatacaccgg cagttggccc 181 agctgggcgg cttggatgcc ctagacgtgg gaaggtggag agttagtgac gacacagtga 241 tgcacttggc cacagcagaa gctcttgtgg aagctgggaa agcccctaag ttgactcaac 301 tgtattacct ccttgctaag cattaccaag actgcatgga agacatggat gggcgggcac 361 caggtggtgc ctcggtgcac aacgccatgc agctgaagcc gggcaagccc aatggctgga 421 ggattccctt caacagccat gagggcggct gtggggctgc catgcgggcc atgtgcatcg 481 gtctcaggtt cccacaccat agccaactgg acacactgat ccaagtgagc atcgagagtg 541 gtcggatgac ccaccaccac ccaacaggct acctgggggc ccttgcgtct gctcttttta 601 cagcctatgc agtgaatagc agaccaccct tgcagtgggg aaaaggactg atggagctgc 661 taccagaagc taaaaagtac attgtccaat caggctactt tgtagaggaa aatcttcaac 721 actggtccta cttccaaacc aaatgggaaa attacctaaa acttagaggg attttggatg 781 gagaatcagc ccctaccttc cctgagtctt tcggtgtgaa ggagagggat cagttctaca 841 cctcccTGAG CTACTCTGGC TGGGGTGGCA GCAGTGGGCA CGATGCCCCC ATGATTGCCT 901 ACGATGCTGT TCTTGCTGCA GGAGACTCCT GGAAGGAGCT TGCCCACCGA GCCTTTTTCC 961 ATGGTGGAGA CAGTGATTCT ACAGCTGCCA TTGCTGGCTG CTGGTGGGGA GTTATGTATG 1021 GTTTTAAAGG AGTGAGTCCC TCCAACTATG AGAAACTAGA ATACAGAAAC CGGCTGGAAG 1081 AGACAGCTAG GGCTTTATAT TCTCTCGGGT CAAAAGAAGA CACTGTAATT TCCCTTTACC 1141 CAACTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC 1201 TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT 1261 ATATATCTTG TGGAAAGGAC GAGAGACTAA CTGAGTCTGT ATGGGCACGC GTTAAGTCga 1321 caatcaacct ctggattaca aaatttgtga aagatt