Construct: ORF TRCN0000468206

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014059.1_s317c1
Derived from:
ccsbBroadEn_00584
DNA Barcode:
CCTGTATACAGTACGATAGAGACC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FMOD (2331)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000468206
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2331 FMOD fibromodulin NM_002023.5 100% 100%
2 mouse 14264 Fmod fibromodulin NM_021355.3 88.7% 92.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1194
ORF length:
1128
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgca gtggacctcc ctcctgctgc tggcagggct cttctccctc tcccaggccc
121agtatgaaga tgaccctcat tggtggttcc actacctccg cagccagcag tccacctact
181acgatcccta tgacccttac ccgtatgaga cctacgagcc ttacccctat ggggtggatg
241aagggccagc ctacacctac ggctctccat cccctccaga tccccgcgac tgcccccagg
301agtgcgactg cccacccaac ttccccacgg ccatgtactg tgacaatcgc aacctcaagt
361acctgccctt cgttccctcc cgcatgaagt atgtgtactt ccagaacaac cagatcacct
421ccatccagga aggcgtcttt gacaatgcca cagggctgct ctggattgct ctccacggca
481accagatcac cagtgataag gtgggcagga aggtcttctc caagctgagg cacctggaga
541ggctgtacct ggaccacaac aacctgaccc ggatgcccgg tcccctgcct cgatccctga
601gagagctcca tctcgaccac aaccagatct cacgggtccc caacaatgct ctggaggggc
661tggagaacct cacggccttg tacctccaac acaatgagat ccaggaagtg ggcagttcca
721tgaggggcct ccggtcactg atcttgctgg accTGAGTTA TAACCACCTT CGGAAGGTGC
781CTGATGGGCT GCCCTCAGCT CTTGAGCAGC TGTACATGGA GCACAACAAT GTCTACACCG
841TCCCCGATAG CTACTTCCGG GGGGCGCCCA AGCTGCTGTA TGTGCGGCTG TCCCACAACA
901GTCTAACCAA CAATGGCCTG GCCTCCAACA CCTTCAATTC CAGCAGCCTC CTTGAGCTAG
961ACCTCTCCTA CAACCAGCTG CAGAAGATCC CCCCAGTCAA CACCAACCTG GAGAACCTCT
1021ACCTCCAAGG CAATAGGATC AATGAGTTCT CCATCAGCAG CTTCTGCACC GTGGTGGACG
1081TCGTGAACTT CTCCAAGCTG CAGGTGCTGC GCCTGGACGG GAACGAGATC AAGCGCAGCG
1141CCATGCCTGC CGACGCGCCC CTCTGCCTGC GCCTTGCCAG CCTCATCGAG ATCTGCCCAA
1201CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
1261ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
1321TATCTTGTGG AAAGGACGAC CTGTATACAG TACGATAGAG ACCACGCGTT AAGTCgacaa
1381tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)