Construct: ORF TRCN0000468462

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002262.1_s317c1
Derived from:
ccsbBroadEn_05083
DNA Barcode:
ACAGGGTCTATCTTCCCTAACTAG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
VKORC1L1 (154807)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000468462
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 154807 VKORC1L1 vitamin K epoxide reductase... NM_173517.6 100% 100%
2 human 154807 VKORC1L1 vitamin K epoxide reductase... XM_011515831.3 75.3% 59.6% (many diffs)
3 human 154807 VKORC1L1 vitamin K epoxide reductase... NM_001284342.3 65.2% 42.8% 193_194ins110;419_531del
4 mouse 69568 Vkorc1l1 vitamin K epoxide reductase... NM_027121.4 92% 97.1% (many diffs)
5 mouse 69568 Vkorc1l1 vitamin K epoxide reductase... NM_001286382.1 66.8% 71% (many diffs)
6 mouse 69568 Vkorc1l1 vitamin K epoxide reductase... NM_001001327.2 65.5% 34.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
594
ORF length:
528
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc ggctcccgtc ctgctaagag tgtcggtgcc gcggtgggag cgggtggccc
121ggtatgcagt gtgcgctgcc ggaatcctgc tctccatcta cgcctaccac gtggagcggg
181agaaggagcg ggaccccgag caccgggccc tctgcgacct ggggccctgg gtgaagtgcT
241CCGCCGCCCT TGCCTCCAGA TGGGGTCGAG GATTTGGTCT TTTGGGTTCC ATTTTTGGAA
301AGGATGGTGT ATTAAACCAG CCAAACAGTG TCTTTGGACT TATATTTTAT ATACTACAGT
361TATTACTTGG CATGACAGCA AGCGCTGTGG CGGCTTTGAT CCTCATGACG TCCTCCATCA
421TGTCGGTCGT GGGGTCCCTG TACCTGGCCT ACATTCTGTA CTTTGTGCTG AAGGAGTTCT
481GCATCATCTG CATCGTCACG TACGTGCTGA ACTTCCTTCT TCTCATTATC AACTACAAAC
541GACTAGTTTA CTTGAACGAG GCCTGGAAGC GGCAGCTGCA ACCCAAGCAG GACTGCCCAA
601CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
661ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
721TATCTTGTGG AAAGGACGAA CAGGGTCTAT CTTCCCTAAC TAGACGCGTT AAGTCgacaa
781tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)