Construct: ORF TRCN0000468631

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001599.1_s317c1
Derived from:
ccsbBroadEn_13411
DNA Barcode:
ATCTCTGTCTTTGTGCACACTGGG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CBY2 (220082)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000468631
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 220082 CBY2 chibby family member 2 NM_001286342.1 100% 100%
2 human 220082 CBY2 chibby family member 2 NM_001286341.2 96.1% 94.3% (many diffs)
3 human 220082 CBY2 chibby family member 2 NM_152719.3 90% 88.8% (many diffs)
4 human 220082 CBY2 chibby family member 2 XM_011534971.2 86.7% 86.7% 1_189del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1302
ORF length:
1236
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgca accagagggg ttgaaatgta ggatggagga atccaatgca gagaggggca
121cagccgaacc cttcccgagg ctccacaact tgtacagcac ccctcgctgc gcgcagcagg
181ccgccctgcc ccggctgagc cgcaggatgg cgagccagca ctcctatcca ctgaaccgct
241tctcctccgt gcctttagac cccatggagc gccccatgtc ccaggccgac ctggagctgg
301actacaaccc gccgcgggtg cagctcagcg acgagatgtt cgtgttccag gacgggcgct
361gggtaaatga gaactgccgc ctgcagtctc cctacttctc cccatccgcc tccttccacc
421acaagctgca ccacaagagg ctggccaagg agtgcatgct gcaggaggag aacaagtctc
481tgcgggagga gaacaaggcc ctgcgcgagg agaaccggat gctcagcaag gagaacaaga
541tcctacaggt cttctgggag gagcacaagg cctcgctggg ccgagaggag agccgggccc
601cctcgccact gctgcacaaa gacagcgcgt ccctggaggt ggtgaagaag gaccacgtcg
661ccctgcaggt gccccgtggc aaggaggaca gcaccctgca gctcctccgg gaggagaatc
721gcgcgctgca gcagctgctg gagcagaaac aggcctactg ggcgcaggca gaggacacgg
781ccgcccctgc cgaggaaagc aagcccgccc cctcacccca cgaggagccc tgcagccccg
841ggctgctgca ggaccagggc tccggcctct cctcccgctt cgaggagccc aaagggcctc
901cggcccggca ggaggactcc aaggagctgc gcgccctgcg gaagatggtc agcaacatgt
961ccgggcccTC CGGGGAGGAG GAGGCCAAGG TGGGCCCGGG CCTGCCCGAC GGCTGCCAGC
1021CCCTGCAGCT GCTGAGAGAG ATGAGGCAGG CGCTGCAGGC CCTGCTCAAG GAGAACCGGC
1081TCCTGCAGGA GGAGAACAGG ACCCTGCAGG TGCTACGGGC AGAGCACAGG GGCTTCCAGG
1141AGGAGAACAA GGCCCTGTGG GAGAACAACA AGCTGAAGCT GCAGCAGAAG CTGGTCATTG
1201ACACCGTGAC CGAGGTCACC GCGCGCATGG AAATGCTCAT CGAGGAGCTC TACGCCTTCA
1261TGCCGGCCAG GAGCCAGGAC CCCAAGAAGC CTAGCAGGGT CTGCCCAACT TTCTTGTACA
1321AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
1381AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
1441AGGACGAATC TCTGTCTTTG TGCACACTGG GACGCGTTAA GTCgacaatc aacctctgga
1501ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)