Construct: ORF TRCN0000468826

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015135.1_s317c1
Derived from:
BRDN0000394410
DNA Barcode:
CCGGTGATCATTTAGCTCTCAGGT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ROR2 (4920)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000468826
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4920 ROR2 receptor tyrosine kinase li... NM_004560.4 99.6% 99.2% (many diffs)
2 human 4920 ROR2 receptor tyrosine kinase li... XM_017014762.1 97.7% 95.6% (many diffs)
3 human 4920 ROR2 receptor tyrosine kinase li... XM_005252008.4 84.9% 84.7% (many diffs)
4 human 4920 ROR2 receptor tyrosine kinase li... XM_006717121.3 84.9% 84.7% (many diffs)
5 human 4920 ROR2 receptor tyrosine kinase li... XM_017014763.1 84.9% 84.7% (many diffs)
6 human 4920 ROR2 receptor tyrosine kinase li... XM_005252009.3 57.2% 57.1% (many diffs)
7 human 4920 ROR2 receptor tyrosine kinase li... XR_001746315.1 46.6% (many diffs)
8 human 4920 ROR2 receptor tyrosine kinase li... NM_001318204.2 45.5% 41.4% (many diffs)
9 mouse 26564 Ror2 receptor tyrosine kinase-li... NM_013846.3 87% 92.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2898
ORF length:
2829
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggcccggggc tcggcgcaag cctggcggcc gctgctgtgc atcccggccg
121tctgggcggc cgccgcgctt ctgctctcag tgtcccggac ttcaggtgaa gtggaggttc
181tggatccgaa cgacccttta ggaccccttg atgggcagga cggcccgatt ccaactctga
241aaggttactt tctgaatttt ctggagccag taaacaatat caccattgtc caaggccaga
301cggcaattct gcactgcaag gtggcaggaa acccaccccc taacgtgcgg tggctaaaga
361atgatgcccc ggtggtgcag gagccgcggc ggatcatcat ccggaagaca gaatatggtt
421cacgactgcg aatccaggac ctggacacga cagacactgg ctactaccag tgcgtggcca
481ccaacgggat gaagaccatt accgccactg gcgtcctgtt tgtgcggctg ggtccaacgc
541acagcccaaa tcataacttt caggatgatt accacgagga tgggttctgc cagccttacc
601ggggaattgc ctgtgcacgc ttcattggca accggaccat ttatgtggac tcgcttcaga
661tgcaggggga gattgaaaac cgaatcacag cggccttcac catgatcggc acgtctacgc
721acctgtcgga ccagtgctca cagttcgcca tcccatcctt ctgccacttc gtgtttcctc
781tgtgcgacgc gcgctcccgg gcacccaagc cgcgtgagct gtgccgcgac gagtgcgagg
841tgctggagag cgacctgtgc cgccaggagt acaccatcgc ccgctccaac ccgctcatcc
901tcatgcggct tcagctgccc aagtgtgagg cgctgcccat gcctgagagc cccgacgctg
961ccaactgcat gcgcattggc atcccagccg agaggctggg ccgctaccat cagtgctata
1021acggctcagg catggattac agaggaacgg caagcaccac caagtcaggc caccagtgcc
1081agccgtgggc cctgcagcac ccccacagcc accacctgtc cagcacagac ttccctgagc
1141ttggaggggg gcacgcctac tgccggaacc ccggaggcca gatggagggc ccctggtgct
1201ttacgcagaa taaaaacgta cgcatggaac tgtgtgacgt accctcgtgt agtccccgag
1261acagcagcaa gatggggatt ctgtacatct tggtccccag catcgcaatt ccactggtca
1321tcgcttgcct tttcttcttg gtttgcatgt gccggaataa gcagaaggca tctgcgtcca
1381caccgcagcg gcgacagctg atggcctcgc ccagccaaga catggaaatg cccctcatta
1441accagcacaa acaggccaaa ctcaaagaga tcagcctgtc tgcggtgagg ttcatggagg
1501agctgggaga ggaccggttt gggaaagtct acaaaggtca cctgttcggc cctgccccgg
1561gggagcagac ccaggctgtg gccatcaaaa cgctgaagga caaagcggag gggcccctgc
1621gggaggagtt ccggcatgag gctatgctgc gagcacggct gcaacacccc aacgtcgtct
1681gcctgctggg cgtggtgacc aaggaccagc ccctgagcat gatcttcagc tactgttcgc
1741acggcgacct ccacgaattc ctggtcatgc gctcgccgca ctcggacgtg ggcagcaccg
1801atgatgaccg cacggtgaag tccgccctgg agccccccga cttcgtgcac cttgtggcac
1861agatcgcggc ggggatggag tacctatcca gccaccacgt ggttcacaag gacctggcca
1921cccgcaatgt gctagtgtac gacaagctga acgtgaagat ctcagacttg ggcctcttcc
1981gagaggtgta tgccgccgat tactacaagc tgctggggaa ctcgctgctg cctatccgct
2041ggatggcccc agaggccatc atgtacggca agttctccat cgactcagac atctggtcct
2101acggtgtggt cctgtgggag gtcttcagct acggcctgca gccctactgc gggtattcca
2161accaggatgt ggtggagatg atccggaacc ggcaggtgct gccttgcccc gatgactgtc
2221ccgcctgggt gtatgccctc atgatcgagt gctggaacga gttccccagc cggcggcccc
2281gcttcaagga catccacagc cggctccgag cctggggcaa cctttccaac tacaggggct
2341cggcgcagac ctcgggggcc agcaacacca cgcagaccag ctccctgagc accagcccag
2401tgagcaatgt gagcaacgcc cgctacgtgg ggcccaagca gaaggccccg cccttcccac
2461agcccCAGTT CATCCCCATG AAGGGCCAGA TCAGACCCAT GGTGCCCCCG CCGCAGCTCT
2521ACATCCCCGT CAACGGCTAC CAGCCGGTGC CGGCCTATGG GGCCTACCTG CCCAACTTCT
2581ACCCGGTGCA GATCCCAATG CAGATGGCCC CGCAGCAGGT GCCTCCTCAG ATGGTCCCCA
2641AGCCCAGCTC ACACCACAGT GGCAGTGGCT CCACCAGCAC AGGCTACGTC ACCACGGCCC
2701CCTCCAACAC ATCCATGGCA GACAGGGCAG CCCTGCTCTC AGAGGGCGCT GATGACACAC
2761AGAACGCCCC AGAAGATGGG GCCCAGAGCA CCGTGCAGGA AGCAGAGGAG GAGGAGGAAG
2821GCTCTGTCCC AGAGACTGAG CTGCTGGGGG ACTGTGACAC TCTGCAGGTG GACGAGGCCC
2881AAGTCCAGCT GGAAGCTTTG CCAACTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA
2941TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA
3001GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGACCGGTGA TCATTTAGCT
3061CTCAGGTACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)