Construct: ORF TRCN0000468933

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003279.1_s317c1
Derived from:
ccsbBroadEn_11033
DNA Barcode:
ATTACGCCTGGACTGGTGATTTAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PLRG1 (5356)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000468933
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5356 PLRG1 pleiotropic regulator 1 NM_001201564.1 99.8% 100% 1005A>G;1191T>A
2 human 5356 PLRG1 pleiotropic regulator 1 NM_002669.4 98.1% 98.2% 286_312del;1032A>G;1218T>A
3 mouse 53317 Plrg1 pleiotropic regulator 1 NM_016784.3 87.2% 94.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1581
ORF length:
1515
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggt cgaggaggta cagaaacatt ctgtacacac ccttgtgttc aggtcgttga
121agaggaccca tgacatgttt gtagctgata atggaaaacc tgtgccttta gatgaagaga
181gtcacaaacg aaaaatggca atcaagcttc gtaatgagta tggtcctgtg ttgcatatgc
241ctacttcaaa agaaaatctt aaagagaagg gtcctcagaa tgcaacggat tcatatgttc
301ataaacagta ccctgccaat caaggacaag aagttgaata ctttgtggca ggggttgctt
361tgacagcaga tactaagatc cagagaatgc caagtgaatc agctgcacag tccttagcgg
421tggcattacc tttgcagacc aaggctgatg caaatcgtac tgcccctagt ggaagtgaat
481accgacatcc tggggcttct gaccgtccac agcctacagc gatgaattca attgtcatgg
541agactggcaa taccaagaac tctgcactga tggctaaaaa agcccctaca atgccaaaac
601cccagtggca cccaccgtgg aaactctaca gggttatcag tgggcatctt ggctgggttc
661gatgtattgc tgtggaacct ggaaatcagt ggtttgttac tggatctgct gacagaacta
721taaagatctg ggacttggct agtggcaaat taaaactgtc attgactggg catattagta
781ctgtgcgggg cgtgatagta agcacaagga gcccatatct gttctcttgt ggagaagaca
841aacaagtgaa atgctgggat ctcgaataca ataaggttat acggcattat catggacatt
901taagtgcagt gtatggtttg gatttgcacc cgacaatcga tgtgttggta acctgtagtc
961gagattcaac tgcacggatt tgggatgtga gaactaaagc cagtgtacac acattatctg
1021gacatacaaa tgcagttgct acagtgagat gtcaggctgc agaaccacag attattacag
1081gaagccatga tactacaatt cgattatggg atctggtggc tggaaaaACA AGAGTGACAT
1141TAACAAATCA CAAAAAATCA GTTAGGGCTG TGGTTTTACA TCCAAGACAT TACACATTTG
1201CATCTGGTTC TCCAGATAAC ATAAAGCAGT GGAAATTCCC TGATGGAAGT TTCATACAAA
1261ATCTTTCCGG TCATAATGCT ATTATTAACA CATTGACGGT AAATTCTGAT GGAGTGCTTG
1321TATCTGGAGC TGACAATGGC ACCATGCATC TTTGGGACTG GAGAACTGGC TACAATTTTC
1381AGAGAGTTCA CGCAGCTGTG CAACCTGGGT CTTTGGACAG TGAATCAGGA ATATTTGCTT
1441GTGCTTTTGA TCAGTCTGAA AGTCGATTAC TAACAGCTGA AGCTGATAAA ACCATTAAAG
1501TATACAGAGA GGATGACACA GCCACAGAAG AAACTCATCC AGTCAGCTGG AAACCAGAAA
1561TTATCAAGAG AAAGAGATTT TACCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
1621CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
1681AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGAATTA CGCCTGGACT
1741GGTGATTTAC ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)