Construct: ORF TRCN0000469119

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000557.1_s317c1
Derived from:
ccsbBroadEn_10519
DNA Barcode:
CACGCCCACCCGTGCCAGGACTAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OR7E91P (79315)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469119
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8587 OR7E2P olfactory receptor family 7... NR_045004.1 45% (many diffs)
2 human 79315 OR7E91P olfactory receptor family 7... NR_002185.3 39.8% 1_402del;417C>G;904_1255del
3 human 219445 OR7E5P olfactory receptor family 7... NR_027688.2 24.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
567
ORF length:
501
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtg cttcttcctg tccaacctgt gctgggctga catcggtttc acctcggcca
121cggttcccaa gatgattgtg gacatgcggt cgcatagcgg agtcatctct tatgcggact
181gccTGACACG GATGTCTTTC TTGGTCCTTT TTGCATGTGT AGAAGACATG CTCCTGACTG
241TGATGGCCTA TGACTGTTTT GTAGCCATCT GTCGCCCTCT GCACTACCCA GTCATCGTGA
301ATCCTCACCT CTGTGTCTTC TTAGTTTCGG TGTCCTTTTC CTTAGCCTGT TGGATTCCCA
361GCTGCGCAGT TGGATTGTGT TGCAATTCAC CTTCTTCAAG AATGTGGAAA TCTCTAATTT
421TGTCTGTGAC CCATCTCAAC CTCTCAAGCT TGCCTGTTCT GACAGCATCA TCGATAGCAT
481GTTCATATAT TTCGATAGTA CTATGTTTGG TTTTCTTCCC ATTTCAGGGA TCCTTTTGTC
541TTACTATAAA ATTGTCCCCT CCATTCTACC CAACTTTCTT GTACAAAGTG GTTGATATCG
601GTAAGCCTAT CCCTAACCCT CTCCTCGGTC TCGATTCTAC GTAGTAATGA ACTAGTCCGT
661AACTTGAAAG TATTTCGATT TCTTGGCTTT ATATATCTTG TGGAAAGGAC GACACGCCCA
721CCCGTGCCAG GACTACACGC GTTAAGTCga caatcaacct ctggattaca aaatttgtga
781aagatt

Download FASTA (ORF) (Full)