Construct: ORF TRCN0000469264

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006343.1_s317c1
Derived from:
ccsbBroadEn_14939
DNA Barcode:
TACAGCTGCCGTGACGTCAGAATC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KCNK6 (9424)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469264
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9424 KCNK6 potassium two pore domain c... NM_004823.3 100% 100%
2 human 9424 KCNK6 potassium two pore domain c... XM_024451788.1 57.1% 57.1% 0_1ins402
3 human 9424 KCNK6 potassium two pore domain c... XM_017027506.1 48.1% 34.2% (many diffs)
4 human 9424 KCNK6 potassium two pore domain c... XM_011527527.1 47.6% 34.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1005
ORF length:
939
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgcg gaggggcgcg cttctggcgg gcgccttggc cgcgtacgcc gcgtacctgg
121tgctgggcgc gctgttggtg gcgcggctgg aggggccgca cgaagccagg ctccgagccg
181agctggagac gctgcgggcg cagctgcttc agcgcagccc gtgtgtggct gcccccgccc
241tggacgcctt cgtggagcga gtgctggcgg ccggacggct ggggcgggtc gtgcttgcta
301acgcttcggg gtccgccaac gcctcggacc ccgcctggga cttcgcctct gctctcttct
361tcgccagcac gctgatcacc accgtgggct atgggtacac aacgccactg actgatgcgg
421gcaaggcctt ctccatcgcc tttgcgctcc tgggcgtgcc gaccaccatg ctgctgctga
481ccgcctcagc ccagcgcctg tcactgctgc tgactcacgt gcccctgtct tggctgagca
541tgcgttgggg ctgggacccc cggcgggcgg cctgctggca cttggtggcc ctgttggggg
601tcgtagtgac cgtctgcttt ctggtgccgg ctgtgatctt tgcccacctc gaggaggcct
661ggagcttctt ggatgccTTC TACTTCTGCT TTATCTCTCT GTCCACCATC GGCCTGGGCG
721ACTACGTGCC CGGGGAGGCC CCTGGCCAGC CCTACCGGGC CCTCTACAAG GTGCTGGTCA
781CAGTCTACCT CTTCCTGGGC CTGGTGGCCA TGGTGCTGGT GCTGCAGACC TTCCGCCACG
841TGTCCGACCT CCACGGCCTC ACGGAGCTCA TCCTGCTGCC CCCTCCGTGC CCTGCCAGTT
901TCAATGCGGA TGAGGACGAT CGGGTGGACA TCCTGGGCCC CCAGCCGGAG TCGCACCAGC
961AACTCTCTGC CAGCTCCCAC ACCGACTACG CTTCCATCCC CAGGTACCCA ACTTTCTTGT
1021ACAAAGTGGT TGATATCGGT AAGCCTATCC CTAACCCTCT CCTCGGTCTC GATTCTACGT
1081AGTAATGAAC TAGTCCGTAA CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG
1141GAAAGGACGA TACAGCTGCC GTGACGTCAG AATCACGCGT TAAGTCgaca atcaacctct
1201ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)