Construct: ORF TRCN0000470192

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007250.1_s317c1
Derived from:
ccsbBroadEn_04008
DNA Barcode:
ACCGACACCCACACTTTTCTGCCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM108 (66000)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000470192
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 66000 TMEM108 transmembrane protein 108 NM_001136469.2 100% 100%
2 human 66000 TMEM108 transmembrane protein 108 NM_023943.4 100% 100%
3 human 66000 TMEM108 transmembrane protein 108 NM_001282865.1 17.3% 16% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1791
ORF length:
1725
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa gagaagttta caggccctct attgccaact gttaagtttc ctgctgatct
121tggcactgac cgaagcgctg gcatttgcca tccaggaacc atctcccagg gaatctcttc
181aggtcctccc ttcaggcact cccccgggaa ccatggtgac agcaccccac agctctacca
241gacatacttc tgtggtgatg ctgaccccca atcccgatgg acccccctca caggctgcag
301ctcccatggc aacaccgaca ccccgtgcag aggggcaccc tcctacgcac accatctcca
361ccatcgctgc gacagtaacc gccccccatt ctgaaagctc cctgtccaca gggcccgctc
421cagcagccat ggcaaccaca tcctccaagc cagagggccg ccctcgaggg caggctgccc
481ccaccatcct gctgacaaag ccaccggggg ccaccagccg ccccaccaca gcgccccccc
541gcactaccac acgcaggccc cccaggcccc caggctcttc ccgaaaaggg gctggtaatt
601catcacgccc tgtcccgcct gcacctggtg gccactccag gagtaaagaa ggacagcgag
661gacgaaatcc aagctccaca cctctggggc agaagcggcc cctggggaaa atctttcaga
721tctacaaggg caacttcaca gggtctgtgg aaccggagcc ctctaccctc acccccagga
781ccccactctg gggctactcc tcttcaccac agccccagac agtggctgcg accacagtgc
841ccagcaatac ctcatgggca cccaccacca cctccctggg gcctgcaaag gacaagccag
901gccttcgcag agcagcccag gggggtggtt ctaccttcac cagccaagga gggacaccag
961atgccacagc agcctcaggt gcccctgtca gtccacaagc tgccccagtg ccttctcagc
1021gcccccacca cggtgaccca caggatggcc ccagccatag tgactcttgg cttactgtta
1081cccctggcac cagcagacct ctgtctacca gctctggggt cttcacggct gccacggggc
1141ccaccccagc tgccttcgat accagtgtct cagccccttc ccaggggatt cctcagggag
1201catccacaac cccacaagct ccaacccatc cctccagggt ctcagaaagc actatttctg
1261gagccaagga ggagactgtg gccaccctca ccatgaccga ccgggtgccc agtcctctct
1321ccacagtggt atccacagcc acaggcaatt tcctcaaccg cctggtcccc gccgggacct
1381ggaagcctgg gacagcaggg aacatctccc atgtggccga gggggacaaa ccgcagcaca
1441gagccaccat ctgcctgagc aagatggata tcgcctgggt gaTCCTGGCC ATCAGCGTGC
1501CCATCTCCTC CTGCTCTGTC CTGCTGACGG TGTGCTGCAT GAAGAGGAAG AAGAAGACCG
1561CCAACCCGGA GAACAACCTG AGCTACTGGA ACAACACCAT CACCATGGAC TACTTCAACA
1621GGCATGCTGT GGAGCTGCCC AGGGAGATCC AGTCCCTTGA AACCTCTGAG GACCAGCTCT
1681CAGAGCCCCG CTCCCCAGCC AATGGCGACT ATAGAGACAC TGGGATGGTC CTTGTTAACC
1741CCTTCTGTCA AGAAACACTG TTTGTGGGAA ACGATCAAGT ATCTGAGATC TACCCAACTT
1801TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
1861CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
1921CTTGTGGAAA GGACGAACCG ACACCCACAC TTTTCTGCCT ACGCGTTAAG TCgacaatca
1981acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)