Construct: ORF TRCN0000470428

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016948.1_s317c1
Derived from:
ccsbBroadEn_04017
DNA Barcode:
GCGTGCTTCATTTGTAATAATTTT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LRFN4 (78999)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000470428
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 78999 LRFN4 leucine rich repeat and fib... NM_001363524.2 100% 100%
2 human 78999 LRFN4 leucine rich repeat and fib... NM_024036.5 100% 100%
3 mouse 225875 Lrfn4 leucine rich repeat and fib... NM_153388.4 87.7% 96.6% (many diffs)
4 mouse 225875 Lrfn4 leucine rich repeat and fib... XM_017318142.1 87.7% 96.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1971
ORF length:
1905
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttgacatggc cccgccgctc ctgctgctgc tgctggccag tggagcggcc gcctgcccgc
121tgccctgcgt ctgccagaac ctgtccgagt cgctcagcac cctctgtgcc caccgaggcc
181tgctgtttgt gccgcccaac gtggaccggc gcacagtgga gctgcggctg gctgacaact
241tcatccaggc cctggggccc cctgacttcc gcaacatgac gggactggtg gacctgacac
301tgtctcgcaa tgccatcacc cgcattgggg cccgcgcctt tggggacctc gagagcctgc
361gttccctcca ccttgacggc aacaggctgg tggagctggg caccgggagc ctccggggcc
421ccgtcaatct gcagcacctc atcctcagcg gcaaccagct gggccgcatc gcgccgggag
481ccttcgacga cttcctagag agcctggagg acctggacct gtcctacaac aacctccggc
541aggtgccctg ggccggcatc ggcgccatgc ctgccctgca caccctcaac ctggaccata
601accttattga cgcactgccc ccaggcgcct tcgcccagct cggtcagctc tcccgcctgg
661acctcacctc caaccgcctg gccacgctgg ctccggaccc gcttttctct cgtgggcgtg
721atgcagaggc ctctcccgcc cccctggtgc tgagctttag cgggaacccc ctgcactgca
781actgtgagct gctgtggctg cggcggctgg cgcggccgga cgacctggaa acgtgcgcct
841ccccgcccgg cctggccggc cgctacttct gggcagtgcc cgagggcgag ttctcctgtg
901agccgcccct cattgcccgc cacacgcagc gcctctgggt gctggaaggc cagcgggcca
961cgctgcggtg ccgggccctg ggtgaccccg cgcctaccat gcactgggtc ggtcctgacg
1021accggttggt tggcaactcc tcccgagccc gggctttccc caacgggacc ttagagattg
1081gggtgaccgg cgctggggac gctgggggct acacctgcat cgccaccaac cctgctggtg
1141aggccacagc ccgagtagaa ctgcgggtgc tggccttgcc ccatggtggg aacagcagtg
1201ccgagggggg ccgccccggg ccctcggaca tcgccgcctc cgctcgcact gctgccgagg
1261gtgaggggac gctggagtct gagccagccg tgcaggtgac ggaggtgacc gccacctcag
1321ggctggtgag ctggggtccc gggcggccag ccgacccagt gtggatgttc caaatccagt
1381acaacagcag cgaagatgag accctcatct accggattgt cccagcctcc agccaccact
1441tcctgctgaa gcacctcgtc cccggcgctg actatgacct ctgcctgctg gccttgtcac
1501cggccgctgg gccctctgac ctcacggcca ccaggctgct gggctgtgcc catttctcca
1561cgctgccggc ctcgccccTG TGCCACGCCC TGCAGGCCCA CGTGCTGGGC GGGACCCTGA
1621CCGTGGCCGT GGGGGGTGTG CTGGTGGCTG CCTTACTGGT CTTCACTGTG GCCTTGCTGG
1681TTCGGGGCCG GGGGGCCGGA AATGGCCGCC TCCCCCTCAA GCTCAGCCAC GTCCAGTCCC
1741AGACCAATGG AGGCCCCAGC CCCACACCCA AGGCCCACCC GCCGCGGAGC CCCCCGCCCC
1801GGCCGCAGCG CAGCTGCTCT CTGGACCTGG GAGATGCCGG GTGCTACGGT TATGCCAGGC
1861GCCTGGGAGG AGCTTGGGCC CGACGGAGCC ACTCTGTGCA TGGGGGGCTG CTCGGGGCAG
1921GGTGCCGGGG GGTAGGAGGC AGCGCCGAGC GGCTGGAAGA GAGTGTGGTG TGCCCAACTT
1981TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
2041CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
2101CTTGTGGAAA GGACGAGCGT GCTTCATTTG TAATAATTTT ACGCGTTAAG TCgacaatca
2161acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)

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