Construct: ORF TRCN0000470572

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013156.1_s317c1
Derived from:
ccsbBroadEn_06785
DNA Barcode:
ATGCAGTTCGTCAATATCTATCTT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PRSS2 (5645)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000470572
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5645 PRSS2 serine protease 2 NM_002770.4 99.5% 99.5% 8T>C;12T>C;270G>A
2 human 5645 PRSS2 serine protease 2 NM_001303414.1 94.2% 94.2% (many diffs)
3 human 5646 PRSS3 serine protease 3 NM_002771.3 93.5% 89% (many diffs)
4 human 5644 PRSS1 serine protease 1 NM_002769.5 93.2% 89.8% (many diffs)
5 human 5646 PRSS3 serine protease 3 NM_001197098.1 89% 86.2% (many diffs)
6 human 5646 PRSS3 serine protease 3 NM_001197097.2 85.9% 80.8% (many diffs)
7 human 5645 PRSS2 serine protease 2 NR_130149.2 82% (many diffs)
8 human 154754 PRSS3P2 PRSS3 pseudogene 2 NR_001296.3 80.8% (many diffs)
9 human 5646 PRSS3 serine protease 3 NM_007343.3 74.8% 71% (many diffs)
10 human 5646 PRSS3 serine protease 3 XM_011517965.1 68.6% 61.8% (many diffs)
11 human 5644 PRSS1 serine protease 1 XM_011516411.1 48.7% 47% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
810
ORF length:
741
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gaatccactc ctgatcctta cctttgttgc agctgctgtt gctgccccct
121ttgatgatga tgacaagatc gttgggggct acatctgtga ggagaattct gtcccctacc
181aggtgtcctt gaattctggc taccacttct gcggtggctc cctcatcagc gaacagtggg
241tggtgtcagc aggtcactgc tacaagtccc gcatccaggt gagactggga gagcacaaca
301tcgaagtcct ggaggggaat gaacagttca tcaatgcagc caagatcatc cgccacccca
361aatacaacag ccggactctg gacaatgaca tccTGCTGAT CAAGCTCTCC TCACCTGCCG
421TCATCAATTC CCGCGTGTCC GCCATCTCTC TGCCCACTGC CCCTCCAGCT GCTGGCACCG
481AGTCCCTCAT CTCCGGCTGG GGCAACACTC TGAGTTCTGG TGCCGACTAC CCAGACGAGC
541TGCAGTGCCT GGATGCTCCT GTGCTGAGCC AGGCTGAGTG TGAAGCCTCC TACCCTGGAA
601AGATTACCAA CAACATGTTC TGTGTGGGCT TCCTCGAGGG AGGCAAGGAT TCCTGCCAGG
661GTGATTCTGG TGGCCCTGTG GTCTCCAATG GAGAGCTCCA AGGAATTGTC TCCTGGGGCT
721ATGGCTGTGC CCAGAAGAAC AGGCCTGGAG TCTACACCAA GGTCTACAAC TATGTGGACT
781GGATTAAGGA CACCATAGCT GCCAACAGCT TGCCAACTTT CTTGTACAAA GTGGTTGATA
841TCGGTAAGCC TATCCCTAAC CCTCTCCTCG GTCTCGATTC TACGTAGTAA TGAACTAGTC
901CGTAACTTGA AAGTATTTCG ATTTCTTGGC TTTATATATC TTGTGGAAAG GACGAATGCA
961GTTCGTCAAT ATCTATCTTA CGCGTTAAGT Cgacaatcaa cctctggatt acaaaatttg
1021tgaaagatt

Download FASTA (ORF) (Full)