Construct: ORF TRCN0000470818

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008903.1_s317c1
Derived from:
ccsbBroadEn_10476
DNA Barcode:
GATCGAAGCCCTATTGCATAAACA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PRRC1 (133619)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000470818
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 133619 PRRC1 proline rich coiled-coil 1 NM_130809.5 99.7% 99.7% 1_3delATG;1299G>A
2 human 133619 PRRC1 proline rich coiled-coil 1 XM_006714529.3 99.7% 99.7% 1_3delATG;1299G>A
3 human 133619 PRRC1 proline rich coiled-coil 1 NM_001286808.2 93.9% 94.1% (many diffs)
4 mouse 73137 Prrc1 proline-rich coiled-coil 1 NM_028447.3 80.9% 87.1% (many diffs)
5 mouse 73137 Prrc1 proline-rich coiled-coil 1 XM_006526287.3 80.9% 87.1% (many diffs)
6 mouse 73137 Prrc1 proline-rich coiled-coil 1 XM_006526288.2 80.9% 87.1% (many diffs)
7 mouse 73137 Prrc1 proline-rich coiled-coil 1 XM_006526289.2 80.9% 87.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1398
ORF length:
1332
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga agagagtgga atagagacaa caccacctgg gactcctcca ccaaatcctg
121cagggctggc tgctactgct atgtcttcta cccctgttcc attagcggca accagttctt
181tttcttctcc aaatgtatcc tccatggagt ccttcccacc actcgcatac tctactcctc
241agccgcccct tcctcctgtg aggccttcag caccattacc ttttgtgcct cctcctgcag
301ttccttctgt cccaccactt gttacttcta tgccacctcc tgtttctcca tcaactgctg
361ctgccttcgg taatcctcct gtatctcact tcccaccttc aacttctgcc ccaaacactc
421ttttacctgc acccccttcg ggtcctccta tatcaggatt ttctgttggt tcaacttatg
481acattacaag gggacatgct gggagagctc cccagacacc cctgatgcca tcattttctg
541caccttcagg aacaggtctt ttgccaactc ctattactca gcaagccagt ttgacatctc
601tggcacaggg aactggaacc acatcagcca ttactttccc agaggagcaa gaagacccta
661gaattactag aggtcaggat gaagcatctg ctggtggaat ctggggtttt attaagggtg
721tggctgggaa tcctatggtg aagtctgtgc ttgataagac aaaacattca gtagaaagca
781tgattacaac gctggaccct ggcatggctc cctatatcaa atctggaggt gaactggata
841ttgtagtgac ctcaaataaa gaagtaaaag ttgctgctgt ccgagatgcc ttccaggagg
901tctttggctt agctgtggtt gtaggggaag ctggacagtc caatattgcc ccacaaccag
961tgggctatgc agctggatta aaaggtgctc aggaacggat agatagctTG CGTCGAACTG
1021GGGTGATCCA TGAAAAACAG ACAGCTGTGT CAGTAGAAAA CTTCATTGCA GAATTGCTGC
1081CTGACAAATG GTTTGACATT GGTTGTTTGG TGGTTGAAGA TCCTGTCCAT GGCATTCATC
1141TAGAAACATT TACACAAGCC ACACCAGTGC CTTTGGAATT TGTACAGCAG GCTCAAAGTC
1201TAACTCCCCA GGACTATAAT CTGAGGTGGT CAGGCCTTTT GGTGACAGTG GGTGAAGTCC
1261TGGAAAAGAG TTTACTGAAT GTCAGCCGGA CTGATTGGCA CATGGCATTT ACTGGGATGT
1321CCCGTCGGCA GATGATCTAC AGTGCAGCCA GAGCGATAGC AGGCATGTAT AAACAGCGCC
1381TGCCACCCAG GACAGTGTGC CCAACTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA
1441TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA
1501GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGAGATCGAA GCCCTATTGC
1561ATAAACAACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)