Construct: ORF TRCN0000470833

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002008.1_s317c1
Derived from:
ccsbBroadEn_05027
DNA Barcode:
TTGTTAACCTGCAACCGGCCATCA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CCDC24 (149473)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000470833
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 149473 CCDC24 coiled-coil domain containi... NM_152499.4 100% 100%
2 human 149473 CCDC24 coiled-coil domain containi... NM_001349127.1 97.5% 78.3% 698_699insCAGG;918_936del
3 human 149473 CCDC24 coiled-coil domain containi... NM_001349128.1 95.6% 95.6% 300_338del;455_456insCAG
4 human 149473 CCDC24 coiled-coil domain containi... NM_001349129.1 56.3% 56.3% 0_1ins399;17_18insCAG
5 human 149473 CCDC24 coiled-coil domain containi... NR_146064.2 46.4% 1_53del;177_178ins296;679_1049del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
987
ORF length:
921
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgct ccggcactcc ccctcgctgt gggagctggt ggaggagcac gttccgctcc
121gggagcgacg cgaagtgaag aggattctgg gggaggcggc ggtggacctg agcctggagc
181tgcgggcgga ggtggcgatg ttacgggcac tgctccaaga ggctcgatcc tctcaagccc
241ccagctcccg ccccatctct gacccctctt ctcttctggc accaccgcct ctcctaaagg
301acctcttgcg ccaggagctc cggcagttgc tccagggtct ccgccacaaa gccatctgtg
361agggcaggga ccaggcccaa gcttgggtcc agtatagccc cagggtcctg cactttgcct
421tggaggagcc caggtgtgat ttgccagaac aggagatatt ccagatgaga ggtggtgggc
481ccagcagcgg tcacagagat ctcagcatca tcaaggacca actgaacgtg tccaacattg
541accaggtggc cagacacctg aggggccTTC TGGAGGAGGA GTGTCACACC TTGGAGAGGG
601AGATCCTCAT CCTGCAGCGC TGCCTGGAAG AGGAGTATTT GAGGCCTTGC CACCCCTCTG
661AGGCAGCCCT GGAGCCCACC CTGGCAGAGC TAAAGGAACA GAAGAAGGCC ATGGAGCAGG
721AGCTGCAGGC ATCTGTGGGG CCTTCTTGTG TCTCTCCCAA CCACAGGCAG CGGCCCTTGG
781GGTCCTCCAC ACAGGGCCTC AGACCCCCGC TTCCCCTCTG CGGGGTTGCA CCTCTCCAGT
841GCTGCCTGCC TGCACCTCCT CTGGAGCCCT ACCTTCGACC TCGAGGCCAG TCGGCTACCC
901ACCGCTGGGG ACGGCAGCTT CAGTGCAGCC CCAGGGAAGG GCCAGCTTCC ACACCCATGT
961CCAGTGCAGC ACCCCAAGCC CCAGCCTGCC CAACTTTCTT GTACAAAGTG GTTGATATCG
1021GTAAGCCTAT CCCTAACCCT CTCCTCGGTC TCGATTCTAC GTAGTAATGA ACTAGTCCGT
1081AACTTGAAAG TATTTCGATT TCTTGGCTTT ATATATCTTG TGGAAAGGAC GATTGTTAAC
1141CTGCAACCGG CCATCAACGC GTTAAGTCga caatcaacct ctggattaca aaatttgtga
1201aagatt

Download FASTA (ORF) (Full)