Construct: ORF TRCN0000471125

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007339.1_s317c1
Derived from:
ccsbBroadEn_00012
DNA Barcode:
CCTGACGCATTCCAATTTCCGTCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ACP5 (54)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000471125
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54 ACP5 acid phosphatase 5, tartrat... NM_001111034.3 100% 100%
2 human 54 ACP5 acid phosphatase 5, tartrat... NM_001111035.3 100% 100%
3 human 54 ACP5 acid phosphatase 5, tartrat... NM_001111036.3 100% 100%
4 human 54 ACP5 acid phosphatase 5, tartrat... NM_001322023.2 100% 100%
5 human 54 ACP5 acid phosphatase 5, tartrat... NM_001611.5 100% 100%
6 human 54 ACP5 acid phosphatase 5, tartrat... XM_005259938.1 100% 100%
7 human 54 ACP5 acid phosphatase 5, tartrat... XM_011528069.2 100% 100%
8 mouse 11433 Acp5 acid phosphatase 5, tartrat... NM_001102404.1 81.3% 85% (many diffs)
9 mouse 11433 Acp5 acid phosphatase 5, tartrat... NM_001102405.1 81.3% 85% (many diffs)
10 mouse 11433 Acp5 acid phosphatase 5, tartrat... NM_007388.3 81.3% 85% (many diffs)
11 mouse 11433 Acp5 acid phosphatase 5, tartrat... XM_006509944.3 81.3% 85% (many diffs)
12 mouse 11433 Acp5 acid phosphatase 5, tartrat... XM_006509945.2 81.3% 85% (many diffs)
13 mouse 11433 Acp5 acid phosphatase 5, tartrat... XM_006509946.1 81.3% 85% (many diffs)
14 mouse 11433 Acp5 acid phosphatase 5, tartrat... XM_011242384.2 81.3% 85% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1041
ORF length:
975
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga catgtggacg gcgctgctca tcctgcaagc cttgttgcta ccctccctgg
121ctgatggtgc cacccctgcc ctgcgctttg tagccgtggg tgactgggga ggggtcccca
181atgccccatt ccacacggcc cgggaaatgg ccaatgccaa ggagatcgct cggactgtgc
241agatcctggg tgcagacttc atcctgtctc taggggacaa tttttacttc actggtgtgc
301aagacatcaa tgacaagagg ttccaggaga cctttgagga cgtattctct gaccgctccc
361ttcgcaaagt gccctggtac gtgctagccg gaaaccatga ccaccttggc aatgtctctg
421cccagattgc atactctaag atctccaagc gctggaactt ccccagccct ttctaccgcc
481tgcacttcaa gatcccacag accaatgtgt ctgtggccat ttttatgctg gacacagtga
541cactatgtgg caactcagat gacttcctca gccagcagcc tgagaggccc cgagacgtga
601agctggcccg cacacagctg tcctggctca agaaacagct GGCGGCGGCC AGGGAGGACT
661ACGTGCTGGT GGCTGGCCAC TACCCCGTGT GGTCCATAGC CGAGCACGGG CCTACCCACT
721GCCTGGTCAA GCAGCTACGG CCACTGCTGG CCACATACGG GGTCACTGCC TACCTGTGCG
781GCCACGATCA CAATCTGCAG TACCTGCAAG ATGAGAATGG CGTGGGCTAC GTGCTGAGTG
841GGGCTGGGAA TTTCATGGAC CCCTCAAAGC GGCACCAGCG CAAGGTCCCC AACGGCTATC
901TGCGCTTCCA CTATGGGACT GAAGACTCAC TGGGTGGCTT TGCCTATGTG GAGATCAGCT
961CCAAAGAGAT GACTGTCACT TACATCGAGG CCTCGGGCAA GTCCCTCTTT AAGACCAGGC
1021TGCCGAGGCG AGCCAGGCCC TGCCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
1081CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
1141AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGACCTG ACGCATTCCA
1201ATTTCCGTCC ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)