Construct: ORF TRCN0000471187

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009671.1_s317c1
Derived from:
ccsbBroadEn_08058
DNA Barcode:
ATCACCTTAGTCCGGTATGTAAAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DKK2 (27123)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000471187
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 27123 DKK2 dickkopf WNT signaling path... NM_014421.3 99.8% 99.6% 437G>A
2 mouse 56811 Dkk2 dickkopf WNT signaling path... NM_020265.4 89.4% 94.9% (many diffs)
3 mouse 56811 Dkk2 dickkopf WNT signaling path... XM_006501818.4 85.1% 90.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
846
ORF length:
777
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggccgcgttg atgcggagca aggattcgtc ctgctgcctg ctcctactgg
121ccgcggtgct gatggtggag agctcacaga tcggcagttc gcgggccaaa ctcaactcca
181tcaagtcctc tctgggcggg gagacgcctg gtcaggccgc caatcgatct gcgggcatgt
241accaaggact ggcattcggc ggcagtaaga agggcaaaaa cctggggcag gcctaccctt
301gtagcagtga taaggagtgt gaagttggga ggtattgcca cagtccccac caaggatcat
361cggcctgcat ggtgtgtcgg agaaaaaaga agcgctgcca ccgagatggc atgtgctgcc
421ccagtacccg ctgcaataat ggcatctgta tcccagttac tgaaagcaTC TTAACCCCTC
481ACATCCCGGC TCTGGATGGT ACTCAGCACA GAGATCGAAA CCACGGTCAT TACTCAAACC
541ATGACTTGGG ATGGCAGAAT CTAGGAAGAC CACACACTAA GATGTCACAT ATAAAAGGGC
601ATGAAGGAGA CCCCTGCCTA CGATCATCAG ACTGCATTGA AGGGTTTTGC TGTGCTCGTC
661ATTTCTGGAC CAAAATCTGC AAACCAGTGC TCCATCAGGG GGAAGTCTGT ACCAAACAAC
721GCAAGAAGGG TTCTCATGGG CTGGAAATTT TCCAGCGTTG CGACTGTGCG AAGGGCCTGT
781CTTGCAAAGT ATGGAAAGAT GCCACCTACT CCTCCAAAGC CAGACTCCAT GTGTGTCAGA
841AAATTTTGCC AACTTTCTTG TACAAAGTGG TTGATATCGG TAAGCCTATC CCTAACCCTC
901TCCTCGGTCT CGATTCTACG TAGTAATGAA CTAGTCCGTA ACTTGAAAGT ATTTCGATTT
961CTTGGCTTTA TATATCTTGT GGAAAGGACG AATCACCTTA GTCCGGTATG TAAACACGCG
1021TTAAGTCgac aatcaacctc tggattacaa aatttgtgaa agatt

Download FASTA (ORF) (Full)