Construct: ORF TRCN0000471559

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002045.3_s317c1
Derived from:
ccsbBroadEn_12129
DNA Barcode:
AAACACCGACTGAAGCATACCTCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ULK4 (54986)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000471559
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54986 ULK4 unc-51 like kinase 4 NM_001322500.2 46.4% 45% (many diffs)
2 human 54986 ULK4 unc-51 like kinase 4 NM_017886.4 44.9% 43.5% (many diffs)
3 human 54986 ULK4 unc-51 like kinase 4 NR_136342.2 39.2% (many diffs)
4 human 54986 ULK4 unc-51 like kinase 4 NM_001322501.2 21.2% 20% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1806
ORF length:
1740
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga aaactttatt ctgtatgagg agatcggaag aggaagcaag actgttgtct
121ataaagggcg acggaaggga acaatcaatt ttgtagccat tctttgtact gataagtgca
181aaaggcctga aataaccaac tgggtccgtc tcacccgtga aataaaacac aagaatattg
241taacttttca tgaatggtat gaaacaagca accacctctg gctagtggtg gaactctgca
301caggtggttc cttaaaaaca gttattgctc aagatgaaaa cctcccagaa gatgttgtga
361gagaatttgg aattgacctg attagtggat tacatcatct tcataaactt ggcattctct
421tttgtgacat ttctcctagg aagatactct tggaagggcc tggcacactg aagtttagca
481acttttgctt ggcaaaagtg gaaggtgaaa atttggaaga gttctttgct ttggtggcag
541cagaggaagg aggaggtgat aatggggaaa atgtcctgaa gaaaagcatg aaaagtagag
601tcaaaggatc tcctgtatat acagcaccag aagttgtgag gggtgctgac ttttccatct
661ccagtgacct ctggtctttg ggctgtctgc tttatgaaat gttttcagga aaacctccat
721tcttctcaga aagtatttca gaattaactg aaaagatctt atgtgaagat cctttgccac
781ctattccgaa agattcttct cgtcctaaag cttcttcaga ttttattaat ttgcttgatg
841ggttacttca aagagatcct cagaaaagat tgacttggac aaggctactg cagcattcat
901tttggaagaa agcttttgct ggagcagatc aggaatcaag cgtcgaagat ctcagtctca
961gcagaaacac tatggagtgt tctgggccac aagattccaa ggagcttttg cagaactctc
1021agagtagaca agcaaaaggg cacaagagtg gtcaaccact aggtcactct ttcagactag
1081aaaatccaac tgagtttcgg cctaagagta ctcttgaggg tcaattgaat gaatccatgt
1141ttcttctcag ttctcgtcct actcccagaa ctagcactgc agtggaagta agtcctggtg
1201aggatatgac tcactgttca ccacagaaga cttctcctct gaccaagatt acaagtggac
1261acctgagtca gcaggacctg gaatcccaga tgagagagct tatctacacg gactcagatc
1321ttgttgtcac ccccattATC GACAATCCAA AGATAATGAA ACAGCCACCA GTTAAATTTG
1381ATGCAAAAAT ATTGCATCTA CCAACATATT CAGTGGATAA GTTATTATTT CTGAAAGATC
1441AAGATTGGAA TGACTTTTTG CAACAAGTGT GCTCGCAGAT CGACTCCACT GAGAAGAGCA
1501TGGGGGCCTC CCGAGCCAAG CTGAATCTCC TTTGCTATTT GTGCGTGGTG GCTGGTCACC
1561AGGAGGTGGC CACCAGGCTC CTCCATTCCC CCCTGTTCCA ATTGCTAATC CAGCATTTGC
1621GGATAGCTCC AAACTGGGAT ATACGGGCCA AGGTTGCTCA CGTAATTGGT TTACTGGCTT
1681CGCACACAGC TGAGCTCCAG GAAAATACAC CTGTTGTTGA GACTACAAGC TCCATTGGAA
1741TCGGGATTTT GAACTGTCTT GTTCAACACT CCACTCCAGT GCCTAGACAG TGCCTTGTGT
1801ATGTATACCC AACTTTCTTG TACAAAGTGG TTGATATCGG TAAGCCTATC CCTAACCCTC
1861TCCTCGGTCT CGATTCTACG TAGTAATGAA CTAGTCCGTA ACTTGAAAGT ATTTCGATTT
1921CTTGGCTTTA TATATCTTGT GGAAAGGACG AAAACACCGA CTGAAGCATA CCTCTACGCG
1981TTAAGTCgac aatcaacctc tggattacaa aatttgtgaa agatt

Download FASTA (ORF) (Full)

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