Construct: ORF TRCN0000473299

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007478.1_s317c1
Derived from:
ccsbBroadEn_14245
DNA Barcode:
ACGCCATTTCACGTCCTTGACCCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FBRS (64319)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000473299
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 64319 FBRS fibrosin XM_011545919.3 35.3% 35.3% (many diffs)
2 human 64319 FBRS fibrosin XM_011545916.3 34.9% 34.9% (many diffs)
3 human 64319 FBRS fibrosin XM_011545917.3 34.9% 34.9% (many diffs)
4 human 64319 FBRS fibrosin NM_001105079.3 34.5% 34.5% (many diffs)
5 mouse 14123 Fbrs fibrosin NM_010183.1 65.4% 68.8% (many diffs)
6 mouse 14123 Fbrs fibrosin XM_006507348.3 31.7% 33.2% (many diffs)
7 mouse 14123 Fbrs fibrosin XM_006507347.3 31.2% 32.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1098
ORF length:
1032
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgca cgtgcgtgtg gcttacatga tcctgagaca ccaggagaaa atgaagggtg
121actcccacaa gcttgacttt cggaatgacc tcctgccctg ccttccgggg ccctatgggg
181ccctgccccc tgggcaggag ctctcccacc cggcctccct cttcactgcg actggtgccg
241tccacgctgc agccaaccct ttcacggcag ctcccggggc ccacggaccc ttcctgagcc
301ccagcaccca cattgatccc tttgggcgtc ccacaagctt cgcctctttg gctgccctct
361ccaacggggc ctttggaggc ctgggcagcc ccacattcaa ctccggcgcc gtctttgccc
421agaaagaaag cccaggggcc ccaccggcct tcgcctcccc accggaccca tggggccgcc
481tgcaccgcag tcctctgacc tttcctgcct gggtccggcc ccctgaggcc gcccggactc
541caggctcaga caaggagcgg cctgtggagc ggagggagcc ctccatcacc aaggaggaga
601aggacaggga cctccccttc tcacggcccc agctccgagt ttctcctgct actcccaagg
661cccgggctgg tgaggagggg cctcggccaa ccaaggaatc tgtgcggGTA AAGGAAGAGC
721GGAAGGAGGA GGCTGCCGCC GCCGCTGCCG CTGCTGCTGC CGCCGCCGCT GCCGCCGCCG
781CAGCAGCCAC TGGGCCCCAG GGCCTTCACC TGCTGTTTGA GAGGCCCCGG CCGCCCCCGT
841TTCTGGGCCC TAGCCCACCA GATCGCTGTG CTGGCTTCCT GGAGCCAACC TGGTTGGCAG
901CACCCCCACG CCTGGCAAGG CCACCCCGCT TCTATGAGGC GGGTGAGGAG CTAACTGGAC
961CCGGGGCCGT GGCCGCTGCC CGCCTCTACG GTCTGGAACC TGCTCACCCC TTGCTCTACA
1021GCCGCTTGGC TCCTCCACCA CCACCTGCTG CGGCCCCGGG AACCCCTCAC CTTCTCCCTG
1081CACTCATGAA ACCCCAATAC CCAACTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA
1141TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA
1201GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGAACGCCAT TTCACGTCCT
1261TGACCCTACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)