Construct: ORF TRCN0000473382

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003065.1_s317c1
Derived from:
ccsbBroadEn_15316
DNA Barcode:
TGCCATTTGCTTCAGTTCCGATTT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KCTD8 (386617)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000473382
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 386617 KCTD8 potassium channel tetrameri... NM_198353.3 99.9% 100% 1269A>G
2 human 386617 KCTD8 potassium channel tetrameri... XM_011513690.3 94.3% 94.4% 962_1045del;1353A>G
3 mouse 243043 Kctd8 potassium channel tetrameri... NM_175519.5 88.4% 94.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1488
ORF length:
1419
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggctctgaag gacacgggca gcggcggcag caccatcctg cccattagcg
121agatggtttc ctcgtccagc tcgcccggcg cgtcggccgc cgccgccccg gggccctgcg
181caccctcgcc cttccctgaa gtagtggagc tgaacgtagg cggccaggtt tatgtgacca
241agcactcgac gctgctcagc gtcccggaca gtactttggc cagcatgttc tcgccctcta
301gtccccgtgg cggcgcccgg cgccggggcg agctgcccag ggacagccgg gcgcgcttct
361tcatcgaccg ggacggcttc cttttcaggt acgtgctgga ttatctgcgg gacaagcaac
421tcgcgctgcc ggagcacttc cccgagaagg agcggctgct gcgcgaggcc gagtatttcc
481agctcaccga cttggtcaag ctgctgtcgc ccaaggtcac caagcagaac tctctcaacg
541acgagggctg ccagagcgac ctggaggaca acgtctcgca gggtagcagc gacgcgctgc
601tgctgcgcgg ggcggcggcc gccgtgccct cgggcccggg agcgcacggt ggtggcggcg
661gcggcggcgc gcaggacaag cgctcgggct tcctcacgct gggctaccgg ggctcctaca
721ccaccgtgcg cgacaaccag gccgacgcca aattccggcg tgtggcgcgc atcatggtgt
781gcgggcgcat cgcgctggcc aaggaggtct tcggggacac gctcaacgag agccgcgacc
841ccgaccggca gccggagaag tacacgtccc gcttctacct caagttcacc tacttggagc
901aggcctttga tcgcctgtcc gaggccggct tccacatggt ggcgtgtaac tcctcgggca
961ccgccgcctt cgtcaaccag taccgcgacg acaagatctg gagcagctac accgagtaca
1021ttttcttccg accaccTCAG AAAATAGTAT CACCTAAACA AGAACATGAA GATAGGAAAC
1081ATGACAAAGT CACTGATAAA GGAAGTGAAA GTGGGACTTC CTGTAATGAG CTCTCCACTT
1141CCAGTTGTGA CAGCCATTCA GAGGCAAGCA CTCCCCAGGA CAACCCATCC AGTGCCCAGC
1201AGGCAACAGC TCACCAACCT AACACTTTAA CATTGGATCG CCCCTCTAAA AAAGCACCTG
1261TACAATGGAT ACCCCCACCA GACAAACGCA GAAACAGTGA ACTCTTTCAG ACCCTCATCA
1321GCAAGTCCCG GGAAACGAAT CTGTCCAAAA AGAAAGTCTG TGAGAAGCTA AGTGTGGAAG
1381AAGAAATGAA AAAGTGTATT CAGGATTTTA AAAAAATCCA CATTCCAGAT TATTTTCCAG
1441AGCGCAAACG CCAATGGCAA TCTGAACTGT TGCAGAAGTA TGGGTTATTG CCAACTTTCT
1501TGTACAAAGT GGTTGATATC GGTAAGCCTA TCCCTAACCC TCTCCTCGGT CTCGATTCTA
1561CGTAGTAATG AACTAGTCCG TAACTTGAAA GTATTTCGAT TTCTTGGCTT TATATATCTT
1621GTGGAAAGGA CGATGCCATT TGCTTCAGTT CCGATTTACG CGTTAAGTCg acaatcaacc
1681tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)