Construct: ORF TRCN0000473410

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014223.4_s317c1
Derived from:
ccsbBroadEn_14946
DNA Barcode:
AGTCAAGTTCTTCGCAAACAGGAG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
IP6K1 (9807)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000473410
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9807 IP6K1 inositol hexakisphosphate k... NM_001242829.1 99.9% 100% 1309C>A
2 human 9807 IP6K1 inositol hexakisphosphate k... NM_153273.4 99.9% 100% 1309C>A
3 human 9807 IP6K1 inositol hexakisphosphate k... NM_001006115.2 62.5% 62.5% 0_1ins495;814C>A
4 mouse 27399 Ip6k1 inositol hexaphosphate kina... NM_013785.2 89.8% 95% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1389
ORF length:
1323
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtg tgtttgtcaa accatggaag tggggcagta tggcaagaat gcaagtcggg
121ctggagaccg gggagtcctc ctggagccct tcatccacca agtaggcgga cacagcagca
181tgatgcgtta cgacgatcac actgtgtgca agcccctcat ctcccgggaa cagcgctttt
241acgagtccct ccctcccgaa atgaaggagt tcacccctga atacaaaggc gtggtatctg
301tctgttttga gggggacagt gatggttaca tcaacttagt ggcctatcct tatgtggaaa
361gtgagactgt ggaacaggat gacacaacag aacgggagca acctcggcgc aaacactccc
421gccggagcct gcaccggtca ggcagtggca gtgaccacaa ggaggagaaa gccagcctgt
481cccttgagac ctctgagagc tcacaggagg caaagagtcc gaaggtggag ctgcacagcc
541actcagaggt ccctttccag atgctagatg gcaacagtgg cttgagttct gagaagatca
601gccacaaccc ctggagcctg cgttgtcaca agcagcagct gagccgcatg cgctccgagt
661ccaaggaccg aaagctctac aagttcctcc tgcttgagaa cgtggtgcac cacttcaagt
721acccctgcgt gttggacctg aagatgggca cgcggcagca tggcgatgac gcgtcagctg
781agaaggcagc ccggcagatg cggaaatgcg agcagagcac atcagccacg ctgggcgtca
841gggtctgcgg catgcaggtg taccagctgg acacagggca ttacctctgc aggaacaagt
901actatggccg tgggctctcc attgaaggct tccgcaatgc cctctatcaa tatctgcaca
961atggcctgga cctgcgacgt gacctgtttg agcctatcct gagcaaactg cggggccTGA
1021AAGCTGTGCT GGAGCGGCAG GCCTCTTACC GCTTCTACTC CAGTTCCCTG CTTGTCATCT
1081ATGATGGCAA GGAGTGCCGG GCTGAGTCCT GCCTGGACCG CCGGTCTGAG ATGCGTCTCA
1141AGCACCTGGA CATGGTGCTC CCTGAGGTGG CGTCATCCTG TGGCCCCAGC ACCAGCCCCA
1201GCAACACCAG CCCCGAGGCG GGTCCCTCCT CTCAGCCCAA GGTGGATGTC CGCATGATTG
1261ACTTTGCACA CAGCACATTC AAGGGCTTCC GGGATGACCC CACCGTGCAT GATGGGCCAG
1321ACAGAGGCTA CGTGTTTGGC CTGGAGAACC TCATCAGCAT CATGGAACAG ATGAGGGACG
1381AGAACCAGTA CCCAACTTTC TTGTACAAAG TGGTTGATAT CGGTAAGCCT ATCCCTAACC
1441CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC GTAACTTGAA AGTATTTCGA
1501TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGAAGTCAA GTTCTTCGCA AACAGGAGAC
1561GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)