Construct: ORF TRCN0000473577

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000054.1_s317c1
Derived from:
ccsbBroadEn_08655
DNA Barcode:
TTACCCTCATTTCCATAGGCGGGG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DPYSL5 (56896)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000473577
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 56896 DPYSL5 dihydropyrimidinase like 5 NM_001253723.1 99.9% 100% 9C>T
2 human 56896 DPYSL5 dihydropyrimidinase like 5 NM_001253724.1 99.9% 100% 9C>T
3 human 56896 DPYSL5 dihydropyrimidinase like 5 NM_020134.4 99.9% 100% 9C>T
4 human 56896 DPYSL5 dihydropyrimidinase like 5 XM_024453007.1 99.9% 100% 9C>T
5 human 56896 DPYSL5 dihydropyrimidinase like 5 XR_001738852.2 30.5% (many diffs)
6 mouse 65254 Dpysl5 dihydropyrimidinase-like 5 NM_023047.2 90.3% 97.8% (many diffs)
7 mouse 65254 Dpysl5 dihydropyrimidinase-like 5 XM_006504045.1 90.3% 97.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1758
ORF length:
1692
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgct tgctaactca gccagcgtga ggatcctcat caagggaggc aaggtggtga
121acgatgactg cacccacgag gctgacgtct acatcgagaa tggcatcatc cagcaggtgg
181gccgcgagct catgatccct ggcggggcca aggtgattga tgccacagga aaactggtga
241tccctggtgg catcgacacc agcacccact tccaccagac cttcatgaat gccacgtgcg
301tggacgactt ctaccatggg accaaggcag cactcgtcgg aggcaccacc atgatcatcg
361gccacgtcct gcccgacaag gagacctccc ttgtggacgc ttatgagaag tgccgaggtc
421tggccgaccc caaggtctgc tgtgattacg ccctccacgt ggggatcacc tggtgggcac
481ccaaggtgaa agcagaaatg gagacactgg tgagggagaa gggtgtcaac tcgttccaga
541tgttcatgac ctacaaggac ctgtacatgc ttcgagacag tgagctgtac caagtgttgc
601acgcttgcaa ggacattggg gcaatcgccc gcgtccatgc tgaaaatggg gagcttgtgg
661ccgagggtgc taaggaggca ctggatttgg ggatcacagg cccagaagga atcgagatca
721gccgtccaga ggagctggaa gctgaagcca ctcatcgtgt tatcaccatt gcaaacagga
781ctcactgtcc aatctacctg gtcaacgtgt ccagtatctc ggctggtgac gttatcgcag
841ctgctaagat gcaagggaag gttgtgctgg cggagaccac cactgcacat gccacgctga
901caggcttaca ctactaccac caggactggt cccacgcggc tgcctatgtc acggtgcctc
961ccctgagact ggacaccaac acctcaacct acctcatgag cctgctggcc aatgacactc
1021tgaacatcgt ggcatcagat caccggcctt tcaccacaaa gcagaaagct atgggcaagg
1081aagacttcac caagatccca catggagtga gtggcgtgca ggaccgcatg agcgtcatct
1141gggagagagg agtggttgga ggaaagatgg atgagaaccg ttttgtggcc gttaccagtt
1201ccaacgcagc taagcttctg aacctgtatc cccgcaaggg ccgcattatt cccggagccg
1261atgctgatgt ggtggtgtgg gacccagaag ccacaaagaC CATCTCAGCC AGCACGCAGG
1321TCCAGGGAGG AGACTTCAAC CTGTATGAGA ACATGCGCTG CCACGGCGTG CCACTGGTCA
1381CCATCAGCCG GGGGCGCGTC GTGTATGAGA ACGGCGTCTT CATGTGCGCC GAGGGCACCG
1441GCAAGTTCTG TCCCCTGAGG TCCTTCCCAG ACACTGTCTA CAAGAAGCTG GTCCAGAGAG
1501AGAAGACTTT AAAGGTTAGA GGAGTGGACC GCACTCCCTA CCTGGGGGAT GTCGCTGTTG
1561TCGTGCACCC TGGGAAAAAA GAGATGGGAA CCCCACTCGC AGACACTCCT ACCCGGCCCG
1621TCACCCGGCA TGGGGGCATG AGGGACCTTC ACGAATCCAG CTTCAGCCTC TCTGGCTCTC
1681AGATCGATGA CCATGTTCCA AAGCGAGCTT CAGCTCGGAT CCTCGCTCCT CCCGGAGGCA
1741GGTCGAGTGG CATTTGGTAC CCAACTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA
1801TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA
1861GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGATTACCCT CATTTCCATA
1921GGCGGGGACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.