Construct: ORF TRCN0000474044
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF011561.1_s317c1
- Derived from:
- ccsbBroadEn_07164
- DNA Barcode:
- GCAAACATTTGTGACATTACGAAA
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- ZNF133 (7692)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000474044
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001282995.2 | 99.7% | 100% | (many diffs) |
| 2 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001083330.4 | 99.7% | 99.8% | (many diffs) |
| 3 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352451.2 | 99.7% | 99.8% | (many diffs) |
| 4 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352456.2 | 99.7% | 99.8% | (many diffs) |
| 5 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352457.2 | 99.7% | 99.8% | (many diffs) |
| 6 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352458.2 | 99.7% | 99.8% | (many diffs) |
| 7 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352459.2 | 99.7% | 99.8% | (many diffs) |
| 8 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_003434.7 | 99.7% | 99.8% | (many diffs) |
| 9 | human | 7692 | ZNF133 | zinc finger protein 133 | XM_024451994.1 | 99.7% | 99.8% | (many diffs) |
| 10 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001282997.2 | 99.6% | 99.8% | (many diffs) |
| 11 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001283000.2 | 99.6% | 99.8% | (many diffs) |
| 12 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001282998.3 | 99.5% | 99.6% | (many diffs) |
| 13 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001282999.3 | 99.5% | 99.6% | (many diffs) |
| 14 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001283001.3 | 99.5% | 99.6% | (many diffs) |
| 15 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352452.2 | 99.5% | 99.6% | (many diffs) |
| 16 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352454.2 | 99.5% | 99.6% | (many diffs) |
| 17 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352455.2 | 99.5% | 99.6% | (many diffs) |
| 18 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352463.2 | 99.5% | 99.6% | (many diffs) |
| 19 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352464.2 | 99.5% | 99.6% | (many diffs) |
| 20 | human | 7692 | ZNF133 | zinc finger protein 133 | XM_011529337.1 | 99.5% | 99.6% | (many diffs) |
| 21 | human | 7692 | ZNF133 | zinc finger protein 133 | XM_011529339.1 | 99.5% | 99.6% | (many diffs) |
| 22 | human | 7692 | ZNF133 | zinc finger protein 133 | XM_017028047.1 | 99.5% | 99.6% | (many diffs) |
| 23 | human | 7692 | ZNF133 | zinc finger protein 133 | XM_017028048.1 | 99.5% | 99.6% | (many diffs) |
| 24 | human | 7692 | ZNF133 | zinc finger protein 133 | XM_024451992.1 | 99.5% | 99.6% | (many diffs) |
| 25 | human | 7692 | ZNF133 | zinc finger protein 133 | XM_024451993.1 | 99.5% | 99.6% | (many diffs) |
| 26 | human | 7692 | ZNF133 | zinc finger protein 133 | XM_024451991.1 | 99.2% | 99.3% | (many diffs) |
| 27 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001283002.3 | 99.1% | 99.2% | (many diffs) |
| 28 | human | 7692 | ZNF133 | zinc finger protein 133 | XM_017028041.1 | 99.1% | 99.2% | (many diffs) |
| 29 | human | 7692 | ZNF133 | zinc finger protein 133 | XM_017028042.1 | 99.1% | 99.2% | (many diffs) |
| 30 | human | 7692 | ZNF133 | zinc finger protein 133 | XM_024451990.1 | 99.1% | 99.2% | (many diffs) |
| 31 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001282996.3 | 97% | 97.1% | (many diffs) |
| 32 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001283007.2 | 93.9% | 90.2% | (many diffs) |
| 33 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001283005.2 | 93.2% | 86% | (many diffs) |
| 34 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352453.1 | 93.1% | 85.9% | (many diffs) |
| 35 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001283006.2 | 92.8% | 89.6% | (many diffs) |
| 36 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352462.2 | 89.2% | 88.9% | (many diffs) |
| 37 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001283003.2 | 89.1% | 88.8% | (many diffs) |
| 38 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001283004.3 | 89.1% | 88.7% | (many diffs) |
| 39 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352450.2 | 89.1% | 88.7% | (many diffs) |
| 40 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352460.2 | 89.1% | 88.7% | (many diffs) |
| 41 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001352461.2 | 89.1% | 88.7% | (many diffs) |
| 42 | human | 7692 | ZNF133 | zinc finger protein 133 | XM_024451995.1 | 89.1% | 88.7% | (many diffs) |
| 43 | human | 7692 | ZNF133 | zinc finger protein 133 | NM_001283008.3 | 85.3% | 85.4% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 2025
- ORF length:
- 1959
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 ttggcatggc attcagggat gtggctgtgg atttcaccca ggatgagtgg aggctgctga 121 gccctgctca aaggactctg tacagagagg tgatgctgga gaactacagc aacctggtct 181 cactgggaat ttcattttct aaaccagaac tcatcaccca gctggagcaa gggaaagaga 241 cctggagaga ggaaaaaaaa tgttcaccgg caacctgtcc agatccagag ccagagctct 301 acctcgatcc tttctgccct ccgggtttct ccagtcagaa attccccatg cagcatgtgc 361 tgtgtaatca tcccccctgg atcttcacat gcttgtgtgc agaaggtaac atccagcctg 421 gggatccagg cccaggggac caggagaagc agcaacaagc ctctgagggg agaccctgga 481 gtgatcaagc agaaggtcct gagggagaag gtgccatgcc tttgtttgga agaaccaaga 541 aaaggactct gggagcgttc tccaggccac cccagaggca gccagtcagc tctcggaacg 601 gcctcagagg ggtggagtta gaagccagcc cagctcagac agggaaccct gaggaaacag 661 acaaattgtt gaagaggata gaagtcttag gatttggaac agtcaactgt ggagagtgtg 721 gactgagctt cagcaagatg acaaacctgc tcagtcacca gcggatacac tcaggggaga 781 agccctacgt gtgtggggta tgtgagaagg gcttcagcct aaagaagagc ctcgccagac 841 accagaaggc acactcgggg gagaagccaa ttgtgtgcag ggagtgtgga cgaggcttta 901 accggaagtc aacgctaatc atacacgaac ggacacactc cggtgagaaa ccttacatgt 961 gcagtgagtg tgggcgaggc ttcagccaga agtcaaacct catcatacac cagaggacac 1021 actcagggga aaagccttat gtgtgccggg aatgtggcaa aggcttcagc cagaagtcag 1081 ctgtcgtgag acaccagagg acacacttgg aggagaagac catcgtgtgc agtgactgtg 1141 gcctgggctt cagcgacagg tcaaacctca tctcccacca gaggacgcac tctggggaga 1201 agccctacgc ctgcaaggag tgtgggcgat gcttcaggca gaggaccacc cttgtcaacc 1261 accagaggac acactcaaag gagaagccct atgtgtgcgg ggtgtgtggg cacagcttca 1321 gccagaattc aaccctcatc tctcacaggc ggacacacac tggggagaag ccgtatgttt 1381 gtggggtgtg tgggcgaggc tttagtctca agtcacacct caacagacac cagaacatac 1441 actcaggaga gaagcccatt gtgtgcaagg actgtggccg gggcttcagc cagcaatcca 1501 acctcatcag acaccagagg acgcactcag gcgagaagcc catggtgtgt ggggagtgcg 1561 ggcgaggctt cagccagaag tcaaaccttg ttgcacacca gaggacgcac tcaggggaga 1621 ggccgtatgt gtgccgagag tgtgggcgag gctttagcca ccaggccgGT CTCATCAGGC 1681 ACAAGCGGAA GCACTCGAGG GAGAAGCCCT ACATGTGCAG GCAGTGTGGA CTGGGCTTTG 1741 GCAATAAGTC AGCTCTAATC ACACACAAGC GGGCTCACTC GGAAGAGAAG CCTTGTGTGT 1801 GCAGAGAGTG TGGCCAAGGC TTTCTCCAAA AGTCACACCT CACCTTACAT CAAATGACAC 1861 ATACGGGGGA GAAGCCATAT GTGTGCAAGA CGTGTGGGCG GGGCTTCAGC CTCAAGTCTC 1921 ACCTCAGCAG ACACAGGAAG ACCACGTCTG TCCACCACAG ACTGCCAGTG CAGCCCGACC 1981 CTGAGCCGTG TGCAGGGCAA CCTTCGGATT CCTTATACTC TCTCTGCCCA ACTTTCTTGT 2041 ACAAAGTGGT TGATATCGGT AAGCCTATCC CTAACCCTCT CCTCGGTCTC GATTCTACGT 2101 AGTAATGAAC TAGTCCGTAA CTTGAAAGTA TTTCGATTTC TTGGCTTTAT ATATCTTGTG 2161 GAAAGGACGA GCAAACATTT GTGACATTAC GAAAACGCGT TAAGTCgaca atcaacctct 2221 ggattacaaa atttgtgaaa gatt