Construct: ORF TRCN0000474503

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005973.1_s317c1
Derived from:
ccsbBroadEn_06071
DNA Barcode:
ATGAGCTTTTGGCAGTTCGACCCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CYP2A6 (1548)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000474503
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1548 CYP2A6 cytochrome P450 family 2 su... NM_000762.6 99.7% 100% (many diffs)
2 human 1549 CYP2A7 cytochrome P450 family 2 su... NM_000764.2 96.4% 93.7% (many diffs)
3 human 1553 CYP2A13 cytochrome P450 family 2 su... NM_000766.5 95% 93.5% (many diffs)
4 human 1549 CYP2A7 cytochrome P450 family 2 su... NM_030589.2 86.1% 83.4% (many diffs)
5 human 1549 CYP2A7 cytochrome P450 family 2 su... XR_935754.3 24.8% (many diffs)
6 mouse 13087 Cyp2a5 cytochrome P450, family 2, ... NM_007812.4 84.5% 85.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1551
ORF length:
1482
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gctggcctca gggatgcttc tggtggcctt gctggtctgc ctgactgtga
121tggtcttgat gtctgtttgg cagcagagga agagcaaggg gaagctgcct ccgggaccca
181ccccattgcc cttcattgga aactacctgc aactgaacac agagcagatg tacaactccc
241tcatgaagat cagtgagcgc tatggccccg tgttcaccat tcacttgggg ccccggcggg
301tcgtggtgct gtgtggacat gatgccgtca gggaggctct ggtggaccag gctgaggagt
361tcagcgggcg aggcgagcaa gccaccttcg actgggtctt caaaggctat ggcgtggtat
421tcagcaacgg ggagcgcgcc aagcagctcc ggcgcttctc catcgccacc ctgcgggact
481tcggggtggg caagcgaggc atcgaggagc gcatccagga ggaggcgggc ttcctcatcg
541acgccctccg gggcactggc ggcgccaata tcgatcccac cttcttcctg agccgcacag
601tctccaatgt catcagctcc attgtctttg gggaccgctt tgactataag gacaaagagt
661tcctgtcact gttgcgcatg atgctaggaa tcttccagtt cacgtcaacc tccacggggc
721agctctatga gatgttctct tcggtgatga aacacctgcc aggaccacag caacaggcct
781ttcagttgct gcaagggctg gaggacttca tagccaagaa ggtggagcac aaccagcgta
841cgctggatcc caattcccca cgggacttca ttgactcctt tctcatccgc atgcaggagg
901aggagaagaa ccccaacacg gagttctact tgaaaaacct ggtgatgacc acgttgaacc
961tcttcattgg gggcaccgag accgtcagca ccaccctgcg ctatggcttc ttgctgctca
1021tgaagcaccc agaggtggag gccaaggtcc atgaggagat tgacagagtg atcggcaaga
1081accggcagcc caagtttgag gaccgggcca agatgcccta catggaggca gtgatccacg
1141agatccaaag atttggagac gtgatcccca tgagtttggc ccgcagagtc aaaaaggaca
1201ccaagtttcg ggatttcttc ctccctaagg gcaccgaagt gtaccctatg ctgggctctg
1261tgctgagaga ccccagtttc ttctccaacc cccaggactt caatccccag catttcctga
1321atgagaaggg gcagtttaag aagagtgatg cttttgtgcc cttttccatc ggaaagcgga
1381actgtttcgg agaaggcctg gccagaatgg agctctttct cttcttcacc accgtcatgc
1441agaacttccg cctcaagtcc tcccagtcac cTAAGGACAT TGACGTGTCC CCCAAACACG
1501TGGGCTTTGC CACGATCCCA CGAAACTACA CCATGAGCTT CCTGCCCCGC TTGCCAACTT
1561TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
1621CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
1681CTTGTGGAAA GGACGAATGA GCTTTTGGCA GTTCGACCCC ACGCGTTAAG TCgacaatca
1741acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)