Construct: ORF TRCN0000474792

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003379.1_s317c1
Derived from:
ccsbBroadEn_07387
DNA Barcode:
AGAGGGCTCGGCTTGAACCCCTGC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GPR52 (9293)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000474792
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9293 GPR52 G protein-coupled receptor 52 NM_005684.5 99.9% 100% 693T>C
2 mouse 620246 Gpr52 G protein-coupled receptor 52 NM_001146330.1 91.5% 95.5% (many diffs)
3 mouse 620246 Gpr52 G protein-coupled receptor 52 XM_017321886.1 91.5% 95.5% (many diffs)
4 mouse 620246 Gpr52 G protein-coupled receptor 52 XM_017321888.1 91.5% 95.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1149
ORF length:
1083
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa tgaatccagg tggactgaat ggaggatcct gaacatgagc agtggcattg
121tgaatgtgtc cgagcgtcac tcctgcccac ttggatttgg ccactacagt gtggtggatg
181tctgcatctt cgagacagtg gttattgtgt tgctgacatt tctgatcatt gctgggaatc
241taacagttat ctttgtcttt cattgtgctc cactgttaca tcattatact accagctatt
301tcattcagac gatggcatat gctgatcttt tcgttggagt tagctgcttg gttcctactc
361tgtcacttct ccactactcc acaggtgtcc acgagtcatt gacttgccag gtttttggat
421atatcatctc agttctaaaa agtgtttcta tggcatgtct tgcttgcatc agtgtggatc
481gttatcttgc aataaccaag cctctttcct acaatcaact ggtcacccct tgtcgcttga
541gaatttgcat tattttgatc tggatctact cctgcctaat tttcttgcct tccttttttg
601gctgggggaa acctggttac catggtgaca tttttgaatg gtgtgccacg tcttggctca
661ccagtgccta ttttactggc tttattgttt gtttacttta tgctcctgct gcctttgttg
721tctgcttcac ttacttccac attttcaaaa tttGCCGCCA GCACACCAAA GAGATAAATG
781ACCGAAGAGC CCGATTCCCT AGTCATGAGG TAGATTCTTC CAGAGAGACT GGACACAGCC
841CTGACCGTCG CTACGCCATG GTTTTGTTTA GGATAACCAG TGTATTTTAT ATGCTGTGGC
901TCCCCTATAT AATTTACTTT CTTCTAGAAA GCTCCCGGGT CTTGGACAAT CCAACTCTGT
961CCTTCTTAAC AACCTGGCTT GCAATAAGTA ATAGTTTTTG TAACTGTGTA ATATACAGCC
1021TCTCCAACAG CGTTTTCCGG CTAGGCCTCC GAAGACTGTC TGAGACAATG TGCACATCCT
1081GTATGTGTGT GAAGGATCAG GAAGCACAAG AACCCAAACC TAGGAAACGG GCTAATTCTT
1141GCTCCATTTG CCCAACTTTC TTGTACAAAG TGGTTGATAT CGGTAAGCCT ATCCCTAACC
1201CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC GTAACTTGAA AGTATTTCGA
1261TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGAAGAGGG CTCGGCTTGA ACCCCTGCAC
1321GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)