Construct: ORF TRCN0000475049

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009013.1_s317c1
Derived from:
ccsbBroadEn_05980
DNA Barcode:
CGGTCAACATCTGGGGCGTAACCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CDKN1B (1027)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000475049
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1027 CDKN1B cyclin dependent kinase inh... NM_004064.4 99.8% 99.4% 326T>G
2 mouse 12576 Cdkn1b cyclin-dependent kinase inh... NM_009875.4 87% 87.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
660
ORF length:
594
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtc aaacgtgcga gtgtctaacg ggagccctag cctggagcgg atggacgcca
121ggcaggcgga gcaccccaag ccctcggcct gcaggaacct cttcggcccg gtggaccacg
181aagagttaac ccgggacttG GAGAAGCACT GCAGAGACAT GGAAGAGGCG AGCCAGCGCA
241AGTGGAATTT CGATTTTCAG AATCACAAAC CCCTAGAGGG CAAGTACGAG TGGCAAGAGG
301TGGAGAAGGG CAGCTTGCCC GAGTTCTACT ACAGACCCCC GCGGCCCCCC AAAGGTGCCT
361GCAAGGTGCC GGCGCAGGAG AGCCAGGATG GCAGCGGGAG CCGCCCGGCG GCGCCTTTAA
421TTGGGGCTCC GGCTAACTCT GAGGACACGC ATTTGGTGGA CCCAAAGACT GATCCGTCGG
481ACAGCCAGAC GGGGTTAGCG GAGCAATGCG CAGGAATAAG GAAGCGACCT GCAACCGACG
541ATTCTTCTAC TCAAAACAAA AGAGCCAACA GAACAGAAGA AAATGTTTCA GACGGTTCCC
601CAAATGCCGG TTCTGTGGAG CAGACGCCCA AGAAGCCTGG CCTCAGAAGA CGTCAAACGT
661ACCCAACTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG
721GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC
781TTTATATATC TTGTGGAAAG GACGACGGTC AACATCTGGG GCGTAACCCA CGCGTTAAGT
841Cgacaatcaa cctctggatt acaaaatttg tgaaagatt

Download FASTA (ORF) (Full)