Construct: ORF TRCN0000475102

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018835.1_s317c1
Derived from:
ccsbBroadEn_15310
DNA Barcode:
AACTCGTTGAACAGCTTATCGAGG
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
BMP2KL (347359)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000475102
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55589 BMP2K BMP2 inducible kinase XM_017008382.1 44.6% 15.9% (many diffs)
2 human 55589 BMP2K BMP2 inducible kinase XM_017008381.1 35.7% 12.7% (many diffs)
3 human 55589 BMP2K BMP2 inducible kinase XM_005263117.1 34.3% 12.2% (many diffs)
4 human 55589 BMP2K BMP2 inducible kinase NM_198892.1 33.2% 11.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
543
ORF length:
474
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gattgcccct tctcctaaga gcagtgaaga ggaagggcaa aaggatgaag
121aagttcttca gggagaacaa ggagatttta atgataatga taccgaacca gaaaatctgg
181gtcacaggcc tctcctcatg gattctgaag atgaggaaga agaggagaaa cgtagctctg
241attctgatta tgagcaggct aaagcaaagt acagtgatat gagccctgtc tacagagaca
301aatctggcag tggaccaacc caagatatta atacaatact cctcacctca gcccaattgt
361cctctgatgt tggagtggag actcctaaac aggagttcga tatatttggc gccgtcccct
421tctttgcagt gtgtgctcaa cagccccagc aagaaaagaa tgaaaagagc ctccctcaac
481acaggtttcc tgctacggga ctccagcagg aggaatttga tgttattcac aaaggcgcct
541tttagcaaga aggtgaatgt acaagaatgc catgcggtgg ggcctgagac acatcccaaa
601agcatagata tatttgactt cactccattt cagccnttcc tcacatcaac aagtaaaagt
661gaaagcaacg aggacctttt tgggcttgtg ccctttgagg aaataatggg gagccagcag
721caaaaagtca aaacagcgca gcttacagaa actgtcctct cgccaaaggc gcacaaagca
781ggatatgtcc aaaagtantn ngnagcggca tcatggcacg ccaactagca aaaagnagac
841tttgaagccn anctactacg cactccagag agggctcgca ggcacaaaaa agtggggtcg
901ccgagtctct caaaccagca atgaatttgt aaccatctca gactccaagg agaacattgg
961tgccgcagtg acTGATGGGA ACGATAGGGG GAACGTCTTA CAACTCGAGG AGAGTCTGTT
1021GGACCCCTTT GGTGCCAAGC CCTTCCATCC TCCAGACCTG TCATGGCACC CTCTACATCA
1081GGGCCTGAAT GACATCCGTG CTGATCACAA TACTGTCCTG CCTAAGCAGC CAAGGCAAAA
1141TTCACTACAT GGGTCATTCC ATAGTGCAGA TGTATTGACA ATGGATGATT TTGGTGCCAT
1201GCCCTTTACA GAACTTGTGG TGCAAAGCAT CACTCTACAG CAGTCCCAAC AGTCCCAACC
1261AGTCGAATTA GACCCATTTG GTGCTGCCCC ATTTCCTTCT AAACAGTTGC CAACTTTCTT
1321GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC TCGATTCTAC
1381GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT ATATATCTTG
1441TGGAAAGGAC GAAACTCGTT GAACAGCTTA TCGAGGACGC GTTAAGTCga caatcaacct
1501ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)