Construct: ORF TRCN0000475176

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000111.1_s317c1
Derived from:
ccsbBroadEn_05992
DNA Barcode:
CTTGGATCGTACGGACGAATAATT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CHI3L1 (1116)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000475176
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1116 CHI3L1 chitinase 3 like 1 NM_001276.4 99.8% 99.7% 433A>G;1092T>C
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1215
ORF length:
1149
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggg tgtgaaggcg tctcaaacag gctttgtggt cctggtgctg ctccagtgct
121gctctgcata caaactggtc tgctactaca ccagctggtc ccagtaccgg gaaggcgatg
181ggagctgctt cccagatgcc cttgaccgct tcctctgtac ccacatcatc tacagctttg
241ccaatataag caacgatcac atcgacacct gggagtggaa tgatgtgacg ctctacggca
301tgctcaacac actcaagaac aggaacccca acctgaagac tctcttgtct gtcggaggat
361ggaactttgg gtctcaaaga ttttccaaga tagcctccaa cacccagagt cgccggactt
421tcatcaagtc agtaccgcca tttctgcgca cccatggctt tgatgggctg gaccttgcct
481ggctctaccc tggacgggga gacaaacagc attttaccac cctaatcaag gaaatgaagg
541ccgaatttat aaaggaagcc cagccaggga aaaagcagct cctgctcagc gcagcactgt
601ctgcggggaa ggtcaccatt gacagcagct atgacattgc caagatatcc caacacctgg
661atttcattag catcatgacc tacgattttc atggagcctg gcgtgggacc acaggccatc
721acagtcccct gttccgaggt caggaggatg caagtcctga cagattcagc aacactgact
781atgctgtggg gtacatgttg aggctggggg ctcctgccag taagctggtg atgggcatcc
841ccaccTTCGG GAGGAGCTTC ACTCTGGCTT CTTCTGAGAC TGGTGTTGGA GCCCCAATCT
901CAGGACCGGG AATTCCAGGC CGGTTCACCA AGGAGGCAGG GACCCTTGCC TACTATGAGA
961TCTGTGACTT CCTCCGCGGA GCCACAGTCC ATAGAATCCT CGGCCAGCAG GTCCCCTATG
1021CCACCAAGGG CAACCAGTGG GTAGGATACG ACGACCAGGA AAGCGTCAAA AGCAAGGTGC
1081AGTACCTGAA GGACAGGCAG CTGGCGGGCG CCATGGTATG GGCCCTGGAC CTGGATGACT
1141TCCAGGGCTC CTTCTGCGGC CAGGATCTGC GCTTCCCTCT CACCAATGCC ATCAAGGATG
1201CACTCGCTGC AACGTACCCA ACTTTCTTGT ACAAAGTGGT TGATATCGGT AAGCCTATCC
1261CTAACCCTCT CCTCGGTCTC GATTCTACGT AGTAATGAAC TAGTCCGTAA CTTGAAAGTA
1321TTTCGATTTC TTGGCTTTAT ATATCTTGTG GAAAGGACGA CTTGGATCGT ACGGACGAAT
1381AATTACGCGT TAAGTCgaca atcaacctct ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)