Construct: ORF TRCN0000475301

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011604.1_s317c1
Derived from:
ccsbBroadEn_06577
DNA Barcode:
CCCCCGATGGTGTATTTCTAAGGC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MFAP3 (4238)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000475301
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4238 MFAP3 microfibril associated prot... NM_001242336.2 99.7% 100% 177T>C;549T>C;786C>T
2 human 4238 MFAP3 microfibril associated prot... NM_005927.5 99.7% 100% 177T>C;549T>C;786C>T
3 human 4238 MFAP3 microfibril associated prot... NM_001135037.2 59.4% 59.6% 0_1ins438;111T>C;348C>T
4 mouse 216760 Mfap3 microfibrillar-associated p... XM_006532851.1 49% 51.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1152
ORF length:
1086
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa gctacattgt tgcttattca ctttagtggc aagtattatt gtgccagctg
121cttttgtttt ggaagatgtg gacttcgacc aaatggtttc actggaagca aatcgtagtt
181cttacaatgc atcctttccc tcaagctttg aactctcagc aagttcccac tcggatgatg
241acgtcatcat agccaaagag ggaactagcg tttcaattga gtgtcttctc acagccagtc
301actatgaaga tgtccattgg cacaattcaa aaggacagca actggatggc agaagcagag
361gtggaaagtg gttggtttct gataacttcc taaacatcac caatgtagct tttgatgacc
421gtgggctcta tacctgtttc gtcacctctc caattcgtgc ctcctactct gtcaccctac
481gtgttatctt cacctcggga gacatgagtg tctattacat gattgtttgc ctgattgcct
541ttacaatcac actcatcttg aatgtcacac ggctgtgcat gatgagcagc catcttcgca
601agactgagaa ggccatcaat gagttcttta gaactgaagg ggctgagaaa cttcagaagg
661cctttgagat tgcaaaacgt atccccatca ttacctcagc caaaactctg gagctcgcca
721aagtcacaca atttaagacc atggagtttg ctcgttatat tgaagaactg gcaagaagtg
781tccctcttcC ACCTCTTATT CTAAACTGTC GAGCCTTTGT TGAGGAGATG TTTGAGGCTG
841TGCGAGTGGA TGACCCTGAT GACCTGGGTG AAAGAATTAA AGAGAGACCT GCCTTGAATG
901CTCAAGGTGG CATCTATGTC ATTAACCCAG AGATGGGACG GAGTAATTCA CCAGGAGGAG
961ATTCAGATGA TGGCTCTCTG AATGAACAAG GCCAGGAAAT AGCAGTTCAG GTTTCTGTCC
1021ACCTTCAGTC AGAAACCAAA AGTATTGATA CAGAGTCTCA AGGCAGCAGT CATTTCAGTC
1081CACCTGATGA TATAGGATCT GCAGAATCTA ACTGTAACTA CAAAGATGGG GCATATGAAA
1141ACTGTCAGCT GTACCCAACT TTCTTGTACA AAGTGGTTGA TATCGGTAAG CCTATCCCTA
1201ACCCTCTCCT CGGTCTCGAT TCTACGTAGT AATGAACTAG TCCGTAACTT GAAAGTATTT
1261CGATTTCTTG GCTTTATATA TCTTGTGGAA AGGACGACCC CCGATGGTGT ATTTCTAAGG
1321CACGCGTTAA GTCgacaatc aacctctgga ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)