Construct: ORF TRCN0000475860

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015478.1_s317c1
Derived from:
ccsbBroadEn_16089
DNA Barcode:
TCCTATCATTGCAAGGAATCCGTG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
C2orf73 (129852)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000475860
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 129852 C2orf73 chromosome 2 open reading f... NM_001369403.1 99.7% 99.3% 398C>T
2 human 129852 C2orf73 chromosome 2 open reading f... XM_005264134.3 99.7% 99.3% 398C>T
3 human 129852 C2orf73 chromosome 2 open reading f... XM_011532513.3 99.7% 99.3% 398C>T
4 human 129852 C2orf73 chromosome 2 open reading f... NM_001369401.1 72.3% 72% 1_189del;587C>T
5 human 129852 C2orf73 chromosome 2 open reading f... NM_001100396.2 57.7% 57.4% 1_363del;761C>T
6 human 129852 C2orf73 chromosome 2 open reading f... XM_024452688.1 57.7% 57.4% 1_363del;761C>T
7 human 129852 C2orf73 chromosome 2 open reading f... XM_024452687.1 48% 47.8% 1_537del;935C>T
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
567
ORF length:
498
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gcaaaagcct tcttgtggaa tagtaccact tgcctctcct ggtacatcag
121cagaacttca aaacaatttt atagaataca tctcttttat acatcaatat gatgccagaa
181aaactccgaa TGAGCCTCTC CAGGGAAAGA GACACGGAGC TTTTGTACAG AGAGAGATAA
241AACCAGGCAG TAGGCCAACA GTTCCTAAAG GAGCAGAGGT ATTACTGAAC ACTCCAGGGT
301CACGTTCATC AGAACAGTCC AAAAAAACAG AGAAAGGAAA CTCAGCGGAA AGCAGAATGA
361TCTCACCAGG TCTCTGCCAA CAAAATTCTC AGGAGCTGTT AGAGCCTAAA ACTCACTTAT
421CAGAAACAGA CGTCAGACAG GCAGCCAAGG CATGCCCCAG CACTCTTGAG AGCAGAGAAA
481AGACCTCAGG CGCCACTCAA ACAACTGTAG GAGATGCTCT TTTCACTAGG CACAAGCCTT
541TAAATCCACC AATTAAAAAA TCAGAATTGC CAACTTTCTT GTACAAAGTG GTTGATATCG
601GTAAGCCTAT CCCTAACCCT CTCCTCGGTC TCGATTCTAC GTAGTAATGA ACTAGTCCGT
661AACTTGAAAG TATTTCGATT TCTTGGCTTT ATATATCTTG TGGAAAGGAC GATCCTATCA
721TTGCAAGGAA TCCGTGACGC GTTAAGTCga caatcaacct ctggattaca aaatttgtga
781aagatt

Download FASTA (ORF) (Full)