Construct: ORF TRCN0000475902

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009886.1_s317c1
Derived from:
ccsbBroadEn_06342
DNA Barcode:
ACATGTTTTTGACAAGCCGTGGTG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GUCY1A1 (2982)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000475902
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2982 GUCY1A1 guanylate cyclase 1 soluble... NM_000856.6 99.7% 99.4% (many diffs)
2 human 2982 GUCY1A1 guanylate cyclase 1 soluble... NM_001130682.3 99.7% 99.4% (many diffs)
3 human 2982 GUCY1A1 guanylate cyclase 1 soluble... NM_001130683.4 99.7% 99.4% (many diffs)
4 human 2982 GUCY1A1 guanylate cyclase 1 soluble... NM_001130684.3 99.7% 99.4% (many diffs)
5 human 2982 GUCY1A1 guanylate cyclase 1 soluble... NM_001256449.2 99.7% 99.4% (many diffs)
6 human 2982 GUCY1A1 guanylate cyclase 1 soluble... XM_005262955.3 99.7% 99.4% (many diffs)
7 human 2982 GUCY1A1 guanylate cyclase 1 soluble... XM_006714196.2 99.7% 99.4% (many diffs)
8 human 2982 GUCY1A1 guanylate cyclase 1 soluble... XM_006714197.2 99.7% 99.4% (many diffs)
9 human 2982 GUCY1A1 guanylate cyclase 1 soluble... NM_001130687.2 90.1% 90% (many diffs)
10 human 2982 GUCY1A1 guanylate cyclase 1 soluble... NM_001130685.3 65.7% 65.6% (many diffs)
11 human 2982 GUCY1A1 guanylate cyclase 1 soluble... XM_005262956.3 65.7% 65.6% (many diffs)
12 human 2982 GUCY1A1 guanylate cyclase 1 soluble... XM_005262957.3 65.7% 65.6% (many diffs)
13 human 2982 GUCY1A1 guanylate cyclase 1 soluble... XM_011531900.2 65.7% 65.6% (many diffs)
14 mouse 60596 Gucy1a3 guanylate cyclase 1, solubl... NM_021896.5 84% 89.5% (many diffs)
15 mouse 60596 Gucy1a3 guanylate cyclase 1, solubl... XM_006501843.3 84% 89.5% (many diffs)
16 mouse 60596 Gucy1a3 guanylate cyclase 1, solubl... XM_011240184.1 84% 89.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2136
ORF length:
2070
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtt ctgcaggaag ctcaaggatc tcaagatcac aggagagtgt cctttctcct
121tactggcacc aggtcaagtt cctaacgagt cttcagagga ggcagcagga agctcagaga
181gctgcaaagc aaccatgccc atctgtcaag acattcctga gaagaacata caagaaagtc
241ttcctcaaag aaaaaccagt cggagccgag tctatcttca cactttggca gagagtattt
301gcaaactgat tttcccagag tttgaacggc tgaatgttgc acttcagaga acattggcaa
361agcacaaaat aaaagaaagc aggaaatctt tggaaagaga agactttgaa aaaacaattg
421cagagcaagc agttgcagca ggagttccag tggaggttat caaagaatct cttggtgaag
481aggtttttaa aatatgttac gaggaagatg aaaacatcct tggggtggtt ggaggcaccc
541ttaaagattt tttaaacagc ttcagtaccc ttctgaaaca gagcagccat tgccaagaag
601caggaaaaag gggcaggctt gaggacgcct ccattctatg cctggataag gaggatgatt
661ttctacatgt ttactacttc ttccctaaga gaaccacctc cctgattctt cccggcatca
721taaaggcagc tgctcacgta ttatatgaaa cggaagtgga agtgtcgtta atgcctccct
781gcttccataa tgattgcagc gagtttgtga atcagcccta cttgttgtac tccgttcaca
841tgaaaagcac caagccatcc ctgtccccca gcaaacccca gtcctcgctg gtgattccca
901catcgctatt ctgcaagaca tttccattcc atttcatgtt tgacaaagat atgacaattc
961tgcaatttgg caatggcatc agaaggctga tgaacaggag agactttcaa ggaaagccta
1021attttgaaga atactttgaa attctgactc caaaaatcaa ccagacgttt agcgggatca
1081tgactatgtt gaatatgcag tttgttgtac gagtgaggag atgggacaac tctgtgaaga
1141aatcttcaag ggttatggac ctcaaaggcc aaatgatcta cattgttgaa tccagtgcaa
1201tcttgttttt ggggtcaccc tgtgtggaca gattagaaga ttttacagga cgagggctct
1261acctctcaga catcccaatt cacaatgcac tgagggatgt ggtcttaata ggggaacaag
1321cccgagctca agatggcctg aagaagaggc tggggaagct gaaggctacc cttgagcaag
1381cccaccaagc cctggaggag gagaagaaaa agacagtaga ccttctgtgc tccatatttc
1441cctgtgaggt tgctcagcag ctgtggcaag ggcaagttgt gcaagccaag aagttcagta
1501atgtcaccat gctcttctca gacatcgttg ggttcactgc catctgctcc cagtgctcac
1561cgctgcaggt catcaccatg ctcaatgcac tgtacactcg cttcgaccag cagtgtggag
1621agctggatgt ctacaaggtg gagaccattg gcgatgccta ttgtgtagct gggggattac
1681acaaagagag tgatactcat gctgttcaga tagcgctgat ggccgtgaag atgatggagc
1741tctctgatga agttatgtct ccccatggag aacctatcaa gatgcgaatt ggactgcact
1801ctggatcagt ttttgctggc gtcgttGGAG TTAAAATGCC CCGTTACTGT CTTTTTGGAA
1861ACAATGTCAC TCTGGCTAAC AAATTTGAGT CCTGCAGTGT ACCACGAAAA ATCAATGTCA
1921GCCCAACAAC TTACAGATTA CTCAAAGACT GTCCTGGTTT CGTGTTTACC CCTCGATCAA
1981GGGAGGAACT TCCACCAAAC TTCCCTAGTG AAATCCCCGG AATCTGCCAT TTTCTGGATG
2041CTTACCAACA AGGAACAAAC TCAAAACCAT GCTTCCAAAA GAAAGATGTG GAAGATGGCA
2101ATGCCAATTT TTTAGGCAAA GCATCAGGAA TAGAATACCC AACTTTCTTG TACAAAGTGG
2161TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
2221CTAGTCCGTA ACTTGAAAGT ATTTCGATTT CTTGGCTTTA TATATCTTGT GGAAAGGACG
2281AACATGTTTT TGACAAGCCG TGGTGACGCG TTAAGTCgac aatcaacctc tggattacaa
2341aatttgtgaa agatt

Download FASTA (ORF) (Full)