Construct: ORF TRCN0000476409
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF013323.1_s317c1
- Derived from:
- ccsbBroadEn_01129
- DNA Barcode:
- GATGTAACCTAGAAGAGCGCGGAA
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- OVGP1 (5016)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000476409
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 5016 | OVGP1 | oviductal glycoprotein 1 | NM_002557.4 | 100% | 100% |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 69
- ORF end:
- 2103
- ORF length:
- 2034
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 ttggcaccat gtggaagctg ttgctgtggg ttgggctggt tcttgtgctg aaacaccacg 121 atggtgctgc ccataaactc gtgtgttatt tcaccaactg ggcacacagt cggccaggcc 181 ctgcctcgat cttgccccat gacctggacc cctttctctg cacccacctg atatttgcct 241 ttgcctcaat gaacaacaat cagattgttg ctaaggatct ccaggatgag aaaattctct 301 acccagagtt caacaaacta aaggagagga acagagagct gaaaacacta ctgtccatcg 361 gcgggtggaa ctttggcacc tcaagattca ccactatgtt gtccacattt gccaaccgtg 421 aaaagtttat tgcttcagtt atatcccttc tgaggacaca tgactttgat ggtcttgacc 481 ttttcttctt atatcctgga ctaagaggca gccccatgca tgaccggtgg acttttctct 541 tcttaattga agagctcctg tttgccttcc ggaaggaggc actgctcacc atgcgcccga 601 ggctgctgct gtctgctgct gtttctgggg tcccacacat cgtccaaaca tcctatgatg 661 tgcgctttct aggaagactc ctggatttca tcaatgtctt gtcttatgac ttacatggaa 721 gttgggaaag gttcacagga cataatagcc ccctcttctc tctgcctgaa gaccccaaat 781 cttcggcata tgctatgaat tattggagaa agcttggggc accctcagag aagctcatca 841 tggggatccc cacctatgga cgtacctttc gcctcctcaa agcctctaag aatgggttgc 901 aggccagagc gatcggacca gcatctccag ggaagtacac caagcaagaa ggcttcttgg 961 cttattttga gatttgttcc tttgtctggg gagcgaagaa gcactggatt gattaccagt 1021 atgtcccgta tgccaacaag gggaaagagt gggttggcta tgacaatgcc atcagcttca 1081 gttacaaggc atggtttata aggcgagagc attttggggg ggccatggtg tggacattgg 1141 acatggatga cgtcaggggc acgttctgtg gcactggccc tttccccctt gtctacgtat 1201 tgaatgatat cctggtgcgg gctgagttca gttcaacttc tttaccacaa ttttggctgt 1261 catctgctgt gaattcttca agcactgacc ctgaaaggct ggctgtgacc acggcatgga 1321 ccactgatag taagattttg cccccaggag gagaggctgg ggtcactgag atccacggaa 1381 agtgtgaaaa tatgactata acccctagag gtacaactgt gacccctaca aaggaaactg 1441 tatcccttgg aaagcacact gtagctctag gagagaagac tgagatcact ggggcaatga 1501 ccatgacttc tgtgggtcat cagtccatga cccctggaga gaaggccctg acccctgtgg 1561 gtcatcaatc tgtgaccact ggacagaaga ccctgacctc tgtgggttat cagtctgtga 1621 cccctgggga aaagaccctg acccctgtgg gtcatcagtc tgtgacccct gtgagtcatc 1681 agtctgtgag ccctggagga acgactatga cccctgtcca ttttcAGACT GAGACCCTTA 1741 GACAGAATAC AGTGGCCCCT AGAAGGAAGG CTGTGGCCCG TGAAAAGGTG ACTGTCCCCT 1801 CCAGAAACAT ATCAGTCACC CCTGAAGGGC AGACTATGCC TTTAAGAGGG GAGAATTTGA 1861 CTTCTGAGGT GGGCACTCAC CCCAGGATGG GTAACTTGGG TCTTCAGATG GAAGCTGAAA 1921 ACAGGATGAT GCTGTCCTCC AGCCCCGTCA TCCAGCTCCC GGAACAAACT CCTCTAGCTT 1981 TTGACAACCG CTTTGTTCCC ATCTATGGAA ACCATTCCTC TGTCAACTCA GTAACCCCTC 2041 AAACAAGTCC TCTTTCTCTA AAAAAAGAAA TCCCAGAAAA CTCTGCTGTG GATGAAGAAG 2101 CCTTGCCAAC TTTCTTGTAC AAAGTGGTTG ATATCGGTAA GCCTATCCCT AACCCTCTCC 2161 TCGGTCTCGA TTCTACGTAG TAATGAACTA GTCCGTAACT TGAAAGTATT TCGATTTCTT 2221 GGCTTTATAT ATCTTGTGGA AAGGACGAGA TGTAACCTAG AAGAGCGCGG AAACGCGTTA 2281 AGTCgacaat caacctctgg attacaaaat ttgtgaaaga tt