Construct: ORF TRCN0000476563

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015547.1_s317c1
Derived from:
ccsbBroadEn_09448
DNA Barcode:
CCTACGGACCTACATATGAATCTA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
IP6K3 (117283)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476563
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 117283 IP6K3 inositol hexakisphosphate k... NM_001142883.1 99.8% 100% 24C>T;165G>A
2 human 117283 IP6K3 inositol hexakisphosphate k... NM_054111.5 99.8% 100% 24C>T;165G>A
3 human 117283 IP6K3 inositol hexakisphosphate k... XM_005248842.3 99.8% 100% 24C>T;165G>A
4 human 117283 IP6K3 inositol hexakisphosphate k... XM_024446323.1 99.8% 100% 24C>T;165G>A
5 human 117283 IP6K3 inositol hexakisphosphate k... XM_024446324.1 99.8% 100% 24C>T;165G>A
6 human 117283 IP6K3 inositol hexakisphosphate k... XM_024446325.1 99.8% 100% 24C>T;165G>A
7 human 117283 IP6K3 inositol hexakisphosphate k... XM_005248843.4 69.1% 65.7% (many diffs)
8 human 117283 IP6K3 inositol hexakisphosphate k... XM_024446326.1 69.1% 65.7% (many diffs)
9 human 117283 IP6K3 inositol hexakisphosphate k... XM_024446327.1 69.1% 65.7% (many diffs)
10 human 117283 IP6K3 inositol hexakisphosphate k... XM_011514295.3 63.4% 62.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1299
ORF length:
1230
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggttgtgcaa aacagcgcag atgccgggga catgagggca ggcgtgcagc
121tggagccctt cctgcaccag gtcggggggc acatgagcgt gatgaagtat gacgagcata
181cggtgtgcaa gcccctcgtc tcccgggagc agaggttcta tgaatccctg ccactggcca
241tgaagcggtt caccccacag tacaaaggta ccgtcacagt gcacctctgg aaagacagca
301caggccatct cagcttggtt gccaacccag tgaaggagag ccaggagccc ttcaaggtct
361ccacagagtc ggcggcggtg gccatatggc agacgctcca gcagaccacc ggcagcaatg
421gcagcgactg cacccttgcc cagtggccgc atgcccagct ggcacgctca cccaaggaga
481gcccggccaa ggctcttctg aggtccgagc cccacctcaa cactccagcc ttctcgctgg
541tggaagacac caacggaaac caggttgaga ggaagagctt caacccgtgg ggcctgcaat
601gccaccaggc ccacctgacc cgcctgtgct ccgagtaccc agagaacaag cggcatcggt
661tcttgttgct ggaaaatgta gtgtcacagt acacgcatcc ctgtgtcctg gatctgaaga
721tggggacccg gcagcacggc gatgatgcat cggaggagaa gaaggcccgc cacatgagga
781agtgtgcgca gagcacctca gcctgcctgg gtgtgcgcat ctgcggcatg caggtttatc
841aaacagataa gaagtacttt ctctgcaaag acaagtacta tggaagaaaa ctctcagtgg
901aggggttcag acaagccctc tatcagttcc tacataatgg aagccacctc cggagggagc
961tcctggagcc catcctgcac cagctccggg ccctcctcTC TGTCATTAGG AGCCAGAGTT
1021CATACCGCTT CTATTCCAGC TCTCTCCTTG TCATCTATGA TGGGCAGGAA CCACCAGAAA
1081GAGCCCCAGG CAGCCCGCAT CCTCACGAGG CTCCCCAGGC AGCCCACGGT AGCTCTCCCG
1141GTGGTCTCAC CAAGGTTGAC ATCCGCATGA TTGACTTTGC TCATACCACA TACAAGGGCT
1201ACTGGAATGA GCACACCACC TACGATGGAC CAGACCCTGG CTATATTTTT GGCCTGGAAA
1261ACCTCATCAG GATCCTGCAG GATATCCAAG AGGGAGAATT GCCAACTTTC TTGTACAAAG
1321TGGTTGATAT CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT
1381GAACTAGTCC GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG
1441ACGACCTACG GACCTACATA TGAATCTAAC GCGTTAAGTC gacaatcaac ctctggatta
1501caaaatttgt gaaagatt

Download FASTA (ORF) (Full)

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