Construct: ORF TRCN0000476681

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009381.1_s317c1
Derived from:
ccsbBroadEn_06401
DNA Barcode:
ACAGTAACAACTGCGATTCACGCA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
HRH1 (3269)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476681
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 3269 HRH1 histamine receptor H1 NM_000861.3 99.9% 99.7% 923T>A
2 human 3269 HRH1 histamine receptor H1 NM_001098211.2 99.9% 99.7% 923T>A
3 human 3269 HRH1 histamine receptor H1 NM_001098212.2 99.9% 99.7% 923T>A
4 human 3269 HRH1 histamine receptor H1 NM_001098213.2 99.9% 99.7% 923T>A
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1527
ORF length:
1461
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgag cctccccaat tcctcctgcc tcttagaaga caagatgtgt gagggcaaca
121agaccactat ggccagcccc cagctgatgc ccctggtggt ggtcctgagc actatctgct
181tggtcacagt agggctcaac ctgctggtgc tgtatgccgt acggagtgag cggaagctcc
241acactgtggg gaacctgtac atcgtcagcc tctcggtggc ggacttgatc gtgggtgccg
301tcgtcatgcc tatgaacatc ctctacctgc tcatgtccaa gtggtcactg ggccgtcctc
361tctgcctctt ttggctttcc atggactatg tggccagcac agcgtccatt ttcagtgtct
421tcatcctgtg cattgatcgc taccgctctg tccagcagcc cctcaggtac cttaagtatc
481gtaccaagac ccgagcctcg gccaccattc tgggggcctg gtttctctct tttctgtggg
541ttattcccat tctaggctgg aatcacttca tgcagcagac ctcggtgcgc cgagaggaca
601agtgtgagac agacttctat gatgtcacct ggttcaaggt catgactgcc atcatcaact
661tctacctgcc caccttgctc atgctctggt tctatgccaa gatctacaag gccgtacgac
721aacactgcca gcaccgggag ctcatcaata ggtccctccc ttccttctca gaaattaagc
781tgaggccaga gaaccccaag ggggatgcca agaaaccagg gaaggagtct ccctgggagg
841ttctgaaaag gaagccaaaa gatgctggtg gtggatctgt cttgaagtca ccatcccaaa
901cccccaagga gatgaaatcc ccagttgtct tcagccaaga ggatgataga gaagtagaca
961aactctactg ctttccactt gatattgagc acatgcaggc tgcggcagag gggagtagca
1021gggactatgt agccgtcaac cggagccatg gccagctcaa gacagatgag cagggcctga
1081acacacatgg ggccagcgag atatcagagg atcagatgtt aggtgatagc caatccttct
1141ctcgaacgga ctcagaTACC ACCACAGAGA CAGCACCAGG CAAAGGCAAA TTGAGGAGTG
1201GGTCTAACAC AGGCCTGGAT TACATCAAGT TTACTTGGAA GAGGCTCCGC TCGCATTCAA
1261GACAGTATGT ATCTGGGTTG CACATGAACC GCGAAAGGAA GGCCGCCAAA CAGTTGGGTT
1321TTATCATGGC AGCCTTCATC CTCTGCTGGA TCCCTTATTT CATCTTCTTC ATGGTCATTG
1381CCTTCTGCAA GAACTGTTGC AATGAACATT TGCACATGTT CACCATCTGG CTGGGCTACA
1441TCAACTCCAC ACTGAACCCC CTCATCTACC CCTTGTGCAA TGAGAACTTC AAGAAGACAT
1501TCAAGAGAAT TCTGCATATT CGCTCCTACC CAACTTTCTT GTACAAAGTG GTTGATATCG
1561GTAAGCCTAT CCCTAACCCT CTCCTCGGTC TCGATTCTAC GTAGTAATGA ACTAGTCCGT
1621AACTTGAAAG TATTTCGATT TCTTGGCTTT ATATATCTTG TGGAAAGGAC GAACAGTAAC
1681AACTGCGATT CACGCAACGC GTTAAGTCga caatcaacct ctggattaca aaatttgtga
1741aagatt

Download FASTA (ORF) (Full)