Construct: ORF TRCN0000476761

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004591.1_s317c1
Derived from:
ccsbBroadEn_04038
DNA Barcode:
GTGGTGCCTATACTTGCACTACTG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ELOVL6 (79071)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476761
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 79071 ELOVL6 ELOVL fatty acid elongase 6 NM_001130721.2 100% 100%
2 human 79071 ELOVL6 ELOVL fatty acid elongase 6 NM_024090.3 100% 100%
3 human 79071 ELOVL6 ELOVL fatty acid elongase 6 XM_011532233.3 100% 100%
4 human 79071 ELOVL6 ELOVL fatty acid elongase 6 XM_011532234.3 100% 100%
5 mouse 170439 Elovl6 ELOVL family member 6, elon... NM_130450.2 92.5% 96.2% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
861
ORF length:
795
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa catgtcagtg ttgactttac aagaatatga attcgaaaag cagttcaacg
121agaatgaagc catccaatgg atgcaggaaa actggaagaa atctttcctg ttttctgctc
181tgtatgctgc ctttatattc ggtggtcggc acctaatgaa taaacgagca aagtttgaac
241tgaggaagcc attagtgctc tggtctctga cccttgcagt cttcagtata ttcggtgctc
301ttcgaactgg tgcttatatg gtgtacattt tgatgaccaa aggcctgaag cagtcagttt
361gtgaccaggg tttttacaat ggacctgtca gcaaattctg ggcttatgca tttgtgctaa
421gcaaagcacc cgaactagga gatacaatat tcattattct gaggaagcag aagctgatct
481tcctgcactg gtatcaccac atcactgtgc tcctgtactc ttggtactcc tacaaagaca
541tggttGCCGG GGGAGGTTGG TTCATGACTA TGAACTATGG CGTGCACGCC GTGATGTACT
601CTTACTATGC CTTGCGGGCG GCAGGTTTCC GAGTCTCCCG GAAGTTTGCC ATGTTCATCA
661CCTTGTCCCA GATCACTCAG ATGCTGATGG GCTGTGTGGT TAACTACCTG GTCTTCTGCT
721GGATGCAGCA TGACCAGTGT CACTCTCACT TTCAGAACAT CTTCTGGTCC TCACTCATGT
781ACCTCAGCTA CCTTGTGCTC TTCTGCCATT TCTTCTTTGA GGCCTACATC GGCAAAATGA
841GGAAAACAAC GAAAGCTGAA TACCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
901CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
961AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGAGTGG TGCCTATACT
1021TGCACTACTG ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)