Construct: ORF TRCN0000476762

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012693.1_s317c1
Derived from:
ccsbBroadEn_05483
DNA Barcode:
CTTCCTGCAACTATTTCTCAGGCG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NCCRP1 (342897)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476762
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 342897 NCCRP1 NCCRP1, F-box associated do... NM_001001414.2 100% 100%
2 human 342897 NCCRP1 NCCRP1, F-box associated do... XM_011526906.3 69.6% 68.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
891
ORF length:
825
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga ggaggtgcgt gagggacacg cgctcggtgg cgggatggaa gccgatgggc
121ccgcgagcct ccaggagctg cctccctcgc cacggtcgcc ttcaccgccg ccgtcgccgc
181caccactgcc ctcgccgccg tcgctgccat cgcccgcagc cccggaggcc cccgagctcc
241ccgagccggc gcagccgtcc gaggctcacg cccggcagct gctgctggag gagtgggggc
301cgctgagcgg gggcctggag ctgccccagc gcctcacctg gaagctgctc ctgttgcggc
361ggccgctcta ccgcaacctg ctgcgctcgc ccaaccccga aggcatcaac atttatgagc
421cagcaccccc tactggtccc acccagcgac ccctggaaac tctgggcaat ttccgtggct
481ggtacattag aactgaaaag ctccagcaga accaaagctg gacagtgaag cagcagtgtg
541tggaccTTCT GGCCGAGGGC CTGTGGGAGG AGCTGCTGGA TGACGAACAA CCAGCCATTA
601CGGTCATGGA CTGGTTCGAG GACAGCCGGC TGGATGCGTG CGTCTATGAG CTGCATGTCT
661GGCTGCTGGC GGCCGACCGC CGCACGGTCA TTGCTCAGCA CCACGTGGCC CCCCGAACTT
721CTGGGAGAGG ACCCCCTGGC CGCTGGGTCC AGGTGTCCCA CGTATTCCGC CATTATGGTC
781CCGGTGTGCG CTTTATCCAC TTCCTGCACA AGGCCAAGAA CCGCATGGAG CCTGGTGGGC
841TGCGGCGGAC ACGGGTGACC GACTCCTCCG TGTCTGTGCA GCTCCGGGAG TGCCCAACTT
901TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
961CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
1021CTTGTGGAAA GGACGACTTC CTGCAACTAT TTCTCAGGCG ACGCGTTAAG TCgacaatca
1081acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)