Construct: ORF TRCN0000477194

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002849.1_s317c1
Derived from:
ccsbBroadEn_10653
DNA Barcode:
ACTTCCTGGCCCAATTGGAAAAGG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LOC613266 (613266)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000477194
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 613266 LOC613266 uncharacterized LOC613266 NR_130925.1 18.3% 1_348del;721_2028del
2 human 613266 LOC613266 uncharacterized LOC613266 NR_130924.1 16% 1_645del;1018_2325del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
441
ORF length:
372
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttGGCACCAT GGGAAAGCGA GACCCTAGAG CCCAGCTATT CCTGCCCAGT GCAGGACTCC
121TCCAGACTTC CAGACTGCAC TGCAGACTGA GGCACTTCCT AGCTGAGCCT CCTTCTTTTC
181TTCTCTCCTT TCAGCTGCTC CTGCTCCATT GCCCATTTCT CTCACCTTTA TCCTGCACTT
241CTGCTTCCAT CTTGGCATCT TCTTCCCTCA AGACCCAACC TGACACCATC AGTATTATTA
301CACTCTTCAT TTCCCAGTGG AGGAGGTGGG GATCCAGGCA AGAAAGACAA AGCGTAAATA
361TGCTCCCTTT AAAATTTTGT ACTGCTCTAT CGCTTCTGGG TCTTTGGGCT AAGATCAAGT
421GTAAAAGTTT GTACTACTCT TTGCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
481CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
541AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGAACTT CCTGGCCCAA
601TTGGAAAAGG ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)