Construct: ORF TRCN0000477619

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018161.1_s317c1
Derived from:
ccsbBroadEn_11742
DNA Barcode:
CTTGATCTACTGTATACCAACAAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM131 (23505)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000477619
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23505 TMEM131 transmembrane protein 131 XM_011510869.1 13.9% 13.9% (many diffs)
2 human 23505 TMEM131 transmembrane protein 131 XM_005263912.3 13.8% 13.9% (many diffs)
3 human 23505 TMEM131 transmembrane protein 131 XM_005263911.1 13.7% 13.8% (many diffs)
4 human 23505 TMEM131 transmembrane protein 131 NM_015348.2 13.5% 13.6% (many diffs)
5 human 23505 TMEM131 transmembrane protein 131 XM_005263909.1 13.4% 13.5% (many diffs)
6 human 23505 TMEM131 transmembrane protein 131 XM_005263910.1 13.3% 13.4% (many diffs)
7 human 23505 TMEM131 transmembrane protein 131 XR_001738682.1 10.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
858
ORF length:
789
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gagttctctc tttgcttctt tttcaagtga ccctaaaata aaacagccaa
121atggaagcaa acacaagttg acaaaggcag cctcgctccc gggcaagaac ggcaacccca
181cttttgctgc agtcacggct ggctacgaca agagcccagg tgggaatggc tttgctaaag
241tttcttcaaa caaaacaggt ttctccagca gccttggcat ttcacacgct cctgttgaca
301gcgatggctc agacagctcg ggtttgtgga gtcccgtcag caacccaagc agccctgact
361tcactcccct caattcgttc tccgcctttg gaaactcttt taatctaact ggtgaagttt
421tcagcaaact cggattatct cgatcgtgca atcaggccTC ACAGAGGAGC TGGAACGAGT
481TTAATAGTGG CCCTTCATAC CTTTGGGAGT CGCCAGCGAC AGATCCCAGT CCTTCCTGGC
541CAGCCAGTTC CGGCTCCCCG ACCCACACAG CCACATCGGT CCTCGGTAAC ACCAGCGGCC
601TGTGGTCCAC CACTCCATTC AGCAGCTCCA TTTGGTCCAG CAACCTTAGC AGCGCCCTTC
661CCTTCACCAC TCCAGCAAAC ACGCTGGCAA GCATCGGCCT CATGGGCACA GAAAACTCCC
721CTGCTCCTCA CGCTCCCTCC ACCTCCAGTC CAGCTGACGA CTTGGGACAG ACCTACAACC
781CGTGGCGGAT ATGGAGCCCC ACGATTGGAA GAAGAAGCTC GGACCCTTGG TCTAATTCGC
841ACTTTCCTCA CGAGAATTTG CCAACTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA
901TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA
961GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGACTTGATC TACTGTATAC
1021CAACAACACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)