Construct: ORF TRCN0000477655

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010513.1_s317c1
Derived from:
ccsbBroadEn_09769
DNA Barcode:
TGTTGCTGTTGCAAATTAATAGAT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FAM151B (167555)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000477655
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 167555 FAM151B family with sequence simila... NM_205548.3 99.8% 99.6% 23C>A
2 human 167555 FAM151B family with sequence simila... XM_006714564.3 98.5% 97.1% (many diffs)
3 human 167555 FAM151B family with sequence simila... XM_011543234.2 93.6% 92.4% (many diffs)
4 human 167555 FAM151B family with sequence simila... XM_017009166.1 87.7% 80% (many diffs)
5 human 167555 FAM151B family with sequence simila... XM_017009167.1 87.7% 80% (many diffs)
6 human 167555 FAM151B family with sequence simila... XM_011543235.2 84.6% 84.4% 23C>A;25_26ins126
7 human 167555 FAM151B family with sequence simila... XM_011543236.2 80.4% 80.4% 0_1ins162
8 human 167555 FAM151B family with sequence simila... XM_017009168.1 80.4% 80.4% 0_1ins162
9 human 167555 FAM151B family with sequence simila... XM_017009169.1 80.4% 80.4% 0_1ins162
10 human 167555 FAM151B family with sequence simila... XM_011543237.2 62.8% 61.9% (many diffs)
11 human 167555 FAM151B family with sequence simila... XM_017009170.1 59% 59% 0_1ins339
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
897
ORF length:
828
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggcagcatcc gctggaggcc aaggatcttg gagtgaaaat atactggaat
121attttctgag aaatagccag attacagcag aagacggtgc tgagatcacc tggtatcatg
181cagctaacca caaggcacaa acaaatgagg cactgaaaag tactgctcac atgatagagg
241ctgatgtcct tcttccaagt gatggatcag aacacagcca gccaattatg gcccatcccc
301ctgaaacaaa cagtgataat actctacagg agtggctgac tgaagttatg aaaagcaata
361aaggcatcaa gctggatttc aaaagtctgg cagttgtaga accatccatg atgctcttgg
421aaaatgtgaa gaggcatctg aagcgtcctg tatggattaa tgccgatatt cttcctggtc
481caaatggaaa tagcaaagta atagatgcaa aaccattttt agacaccgtg atatccttct
541ttccagacgt gacgttttcc cTGGGTTGGA CAACAGGATG GCATCCTGAG AAAGTCAATG
601AAGGGTACAG TTGGACAATG GTGAAAGAGA TGGAATATAT ATGTAATGAA CTAAGTCAGC
661CTGTAACGTT CCCTGTCAGA GCAGCATTAG TCAGGCAGTC TTGTTCTCAG TTACTTTGGC
721TGTTAAAGAA ATCAAACAGG TACAGCCTGA CTATTTGGAC TGGAAAAAAT GATAACTATT
781CCGTTGAAGA TTTACTTTAC ATTAGAGACC ATTTTGACAA AAAACAAGTT TTCTATGACA
841TCTTGGAACC ACAAAACCAT GAATTTAAAC AAGCCATTGG AATCAAAGTT AATCTCTTGC
901CAACTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
961TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
1021ATATATCTTG TGGAAAGGAC GATGTTGCTG TTGCAAATTA ATAGATACGC GTTAAGTCga
1081caatcaacct ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)