Construct: ORF TRCN0000477703

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002148.1_s317c1
Derived from:
ccsbBroadEn_10671
DNA Barcode:
TTATTAGGCTATTGAAGAAAGCCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ADH6 (130)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000477703
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 130 ADH6 alcohol dehydrogenase 6 (cl... NM_000672.4 80.1% 74% 828_963del;1022_1104del
2 human 130 ADH6 alcohol dehydrogenase 6 (cl... NM_001102470.2 78.6% 72.6% 828_963del;1022_1125del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
951
ORF length:
885
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgag tactacaggc caagtcatca gatgcaaagc agccatactc tggaagcctg
121gtgcaccatt ttctattgaa gaggtagaag tggccccacc aaaggcaaag gaagttcgca
181taaaggttgt ggccaccgga ctgtgtggta cagagatgaa agtgttgggg agtaaacact
241tggacctctt gtatcccacc atcttgggcc atgaaggggc tggaatcgtt gagagtattg
301gagaaggagt aagcacagtg aaaccaggtg acaaagttat cacactcttt ctgccacagt
361gtggagaatg tacctcttgc ctgaattctg agggcaattt ttgtatacaa ttcaaacagt
421caaaaaccca actgatgtct gatggtacca gcaggtttac ctgcaaggga aaatcaatat
481atcactttgg taataccagc accttctgtg aatacacagt gataaaggaa atctcagttg
541ccaagattga tgcagtcgct cctctagaga aagtatgcct aattagctgt ggcttttcca
601ctgggtttGG TGCTGCAATC AATACTGCCA AGGTGACTCC AGGTTCTACC TGTGCTGTGT
661TTGGCCTGGG AGGAGTCGGC TTGTCTGTTG TCATGGGTTG TAAAGCAGCA GGAGCAGCCA
721GGATCATTGG AGTGGATGTC AACAAGGAGA AATTTAAGAA GGCACAGGAA TTGGGTGCTA
781CTGAGTGCCT CAACCCTCAG GACTTAAAGA AACCCATTCA AGAAGTTTTA TTTGATATGA
841CAGATGCTGG TATAGACTTC TGCTTTGAGG CCATTGGAAA TCTGGACGTT CTGGCTGGAA
901GAGCAGACAG CACATCCCTA AACTGGTTGC TGATTATATG GCAGAGAAGT TGCCCAACTT
961TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
1021CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
1081CTTGTGGAAA GGACGATTAT TAGGCTATTG AAGAAAGCCT ACGCGTTAAG TCgacaatca
1141acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)