Construct: ORF TRCN0000477793

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006537.1_s317c1
Derived from:
ccsbBroadEn_09286
DNA Barcode:
CCGACTCCTTGTTAGTGGTATGTC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF30 (90075)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000477793
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 90075 ZNF30 zinc finger protein 30 NM_001099437.2 99.9% 99.8% 1477A>G
2 human 90075 ZNF30 zinc finger protein 30 NM_001099438.1 99.9% 99.8% 1477A>G
3 human 90075 ZNF30 zinc finger protein 30 XM_011527443.2 99.9% 99.8% 1477A>G
4 human 90075 ZNF30 zinc finger protein 30 XM_011527444.1 99.9% 99.8% 1477A>G
5 human 90075 ZNF30 zinc finger protein 30 XM_017027423.1 99.9% 99.8% 1477A>G
6 human 90075 ZNF30 zinc finger protein 30 XM_017027424.1 99.9% 99.8% 1477A>G
7 human 90075 ZNF30 zinc finger protein 30 NM_194325.3 99.7% 99.6% 159_160insGCA;1474A>G
8 human 90075 ZNF30 zinc finger protein 30 XM_017027425.1 99.7% 99.6% 159_160insGCA;1474A>G
9 human 90075 ZNF30 zinc finger protein 30 XM_017027426.1 99.7% 99.6% 159_160insGCA;1474A>G
10 human 90075 ZNF30 zinc finger protein 30 XM_017027428.1 86.6% 86.3% (many diffs)
11 human 90075 ZNF30 zinc finger protein 30 NR_024018.2 70.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1941
ORF length:
1872
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggcccataaa tatgtgggtt tgcagtatca cggatcagtg acatttgagg
121atgtggccat agccttctcc cagcaggagt gggagagtct ggactcttcc cagaggggct
181tgtacagaga tgtgatgttg gagaactaca ggaacttggt gtcaatggca ggacattccc
241gttctaaacc acatgtgatc gccttattgg aacaatggaa agagcctgaa gtgacagtga
301ggaaagatgg aagaagatgg tgcacagatt tgcagttgga agatgataca atcggctgta
361aagaaatgcc cacctctgaa aactgtccat cttttgctct acatcagaaa ataagtagac
421agaaaccacg tgaatgtcag gaatatggaa agaccctttg tcaagactca aagcctgttc
481aacatgaaag aatacatagt agtgaaaaac ccaacagatg taaagaatgt gggaagaact
541ttagtaatgg acatcaactc accatacatc agagattgca tgttggtgag aaaccctata
601aatatgaaaa atgtgggaag gcctttatca gtggctcagc ctttgttaag catgggagaa
661ttcacactgg tgagaagcca ctcaaatgta agcaatgtgg aaagactatt agtggtagct
721atcaacttac agtacataag agtattcata ctgggaagaa accatatgag tgcggggaat
781gtgggaaagc ttttctagta tatggaaagc ttacccggca tcagagtact cacactggtg
841aaaaaccctt tgggtgtgag gagtgtggga aggccttcag taccttttca tacctggttc
901aacatcagcg aattcatacc agtgaaaaac cttacgaatg caaagaatgt gggaaggcct
961ttagcactag ctcacccctt gctaagcatc agagaattca tactggcgag aaaccctatg
1021aatgtaagga gtgtgggaag tccttcactg tgtatggaca gcttactcga catcagagta
1081ttcatactgg tgagaaacct tttgaatgta aggaatgtgg aaaggccttt agacttagtt
1141ccttccttca tgcacatcag cgaattcatg cagagataaa gccctacgga tgcaaggaat
1201gcgggagaac cttcagtcgt gcctcatatc ttgttcaaca tggaagactt cacactggcg
1261agaagcccta tgaatgtaag gagtgtggca aggcctttag tactggctca taccttgttc
1321agcatcagag gatccatact ggggagaaac cctatgaatg taaggaatgt ggcaaagcct
1381ttattagtcg ccatcagctt accgtacatc aaagggttca tactggagag aaaccctatg
1441agtgtaagga atgtggcaag gccttcagag tgcacgtaca tctcacacag catcggaaaa
1501ttcatactga tgtaaagccc tatgaatgta aggaatgtgg aaaggctttt agtcgagccT
1561CGTACCTTGT ACAACATAGC AGAATCCATA CTGGTAAGAA GCCCTATGAG TGTAAGGAGT
1621GTGGCAAGGC CTTCAGTTCT GGCTCATACC TTGTTCAGCA TCAAAGAATT CATACTGGGG
1681AGAAACCCTA TGAATGTAAC AAATGTGGGA AAGCCTTTAC TGTTTATGGA CAACTTATTG
1741GACATCAGAG TGTTCACACT GGTGAGAAAC CTTTTGAATG TAAGGAATGC GGGAAGGCCT
1801TTAGACTTAA TTCATTCCTT ACTGAACATC AGCGGGTACA CACTGGTGAG AAACCCTTTA
1861AATGCAAAAA ATGTGGGAAG ACCTTTAGAT ACAGTTCAGC CCTTAAAGTG CATCTGAGAA
1921AACATATGAG TGTTATACCC TTGCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
1981CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
2041AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGACCGA CTCCTTGTTA
2101GTGGTATGTC ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)