Construct: ORF TRCN0000478676

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014999.1_s317c1
Derived from:
ccsbBroadEn_08403
DNA Barcode:
ATGGCCGCGACGAATACATGTTGT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MANSC1 (54682)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000478676
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54682 MANSC1 MANSC domain containing 1 NM_018050.4 99.8% 99.7% 163G>A;1173C>T
2 human 54682 MANSC1 MANSC domain containing 1 NM_001363613.2 91.9% 91.8% 38_39ins102;61G>A;1071C>T
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1359
ORF length:
1293
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtt cttcggggga gaagggagct tgacttacac tttggtaata atttgcttcc
121tgacactaag gctgtctgct agtcagaatt gcctcaaaaa gagtctagaa gatgttgtca
181ttgacatcca gtcatctctt tctaagggaa tcagaggcaa tgagcccata tatacttcaa
241ctcaagaaga ctgcattaat tcttgctgtt caacaaaaaa catatcaggg gacaaagcat
301gtaacttgat gatcttcgac actcgaaaaa cagctagaca acccaactgc tacctatttt
361tctgtcccaa cgaggaagcc tgtccattga aaccagcaaa aggacttatg agttacagga
421taattacaga ttttccatct ttgaccagaa atttgccaag ccaagagtta ccccaggaag
481attctctctt acatggccaa ttttcacaag cagtcactcc cctagcccat catcacacag
541attattcaaa gcccaccgat atctcatgga gagacacact ttctcagaag tttggatcct
601cagatcactt ggagaaacta tttaagatgg atgaagcaag tgcccagctc cttgcttata
661aggaaaaagg ccattctcag agttcacaat tttcctctga tcaagaaata gctcatctgc
721tgcctgaaaa tgtgagtgcg ctcccagcta cggtggcagt tgcttctcca cataccacct
781cggctactcc aaagcccgcc acccttctac ccaccaatgc ttcagtgaca ccttctggga
841cttcccagcc acagctggcc accacagctc cacctgtaac cactgtcact tctcagcctc
901ccacgaccct catttctaca gtttttacac gggctgcggc tacactccaa gcaatggcta
961caacagcagt tctgactacc acctttcagg cacctacgga ctcgaaaggc agcttagaaa
1021ccataccgtt tacagaaatc tccaacctaa ctttGAACAC AGGGAATGTG TATAACCCTA
1081CTGCACTTTC TATGTCAAAT GTGGAGTCTT CCACTATGAA TAAAACTGCT TCCTGGGAAG
1141GTAGGGAGGC CAGTCCAGGC AGTTCCTCCC AGGGCAGTGT TCCAGAAAAT CAGTACGGCC
1201TTCCATTTGA AAAATGGCTT CTTATCGGGT CCCTGCTTTT TGGTGTCCTG TTCCTGGTGA
1261TAGGCCTCGT CCTCCTGGGT AGAATCCTCT CGGAATCACT CCGCAGGAAA CGTTACTCAA
1321GACTGGATTA TTTGATCAAT GGGATCTATG TGGACATCTA CCCAACTTTC TTGTACAAAG
1381TGGTTGATAT CGGTAAGCCT ATCCCTAACC CTCTCCTCGG TCTCGATTCT ACGTAGTAAT
1441GAACTAGTCC GTAACTTGAA AGTATTTCGA TTTCTTGGCT TTATATATCT TGTGGAAAGG
1501ACGAATGGCC GCGACGAATA CATGTTGTAC GCGTTAAGTC gacaatcaac ctctggatta
1561caaaatttgt gaaagatt

Download FASTA (ORF) (Full)