Construct: ORF TRCN0000478850
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF015220.1_s317c1
- Derived from:
- ccsbBroadEn_13585
- DNA Barcode:
- ACCATATCCCGGAAACATCTAACC
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- C17orf67 (339210)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000478850
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 339210 | C17orf67 | chromosome 17 open reading ... | NM_001085430.4 | 100% | 100% |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 93
- ORF end:
- 363
- ORF length:
- 270
- Sequence:
-
1 TCAGACAGTG GTTCAAAGTT TTTTTCTTCC ATTTCAGGTG TCGTGAGGCT AGCATCGATT 61 GATCAACAAG TTTGTACAAA AAAGTTGGCA CCATGAAGAC ATTGCCTGTG CTCGTGCTGT 121 CTCTTACCTT ACTGACTGTC TTCTCAGAGA CCTCCCCGAT TTTGACAGAG AAGCAGGCCA 181 AACAGCTCCT AAGATCTCGG CGACAGGATA GACCAAGCAA ACCCGGATTC CCCGATGAGC 241 CAATGCGGGA ATACATGCAC CACCTGCTCG CCCTGGAGCA TCGCGCTGAG GAGCAGTTCC 301 TGGAGCACTG GCTGAACCCT CACTGCAAAC CCCACTGTGA CAGGAACAGG ATTCATCCTG 361 TGTTGCCAAC TTTCTTGTAC AAAGTGGTTG ATATCGGTAA GCCTATCCCT AACCCTCTCC 421 TCGGTCTCGA TTCTACGTAG TAATGAACTA GTCCGTAACT TGAAAGTATT TCGATTTCTT 481 GGCTTTATAT ATCTTGTGGA AAGGACGAAC CATATCCCGG AAACATCTAA CCACGCGTTA 541 AGTCgacaat caacctctgg attacaaaat ttgtgaaaga tt