Construct: ORF TRCN0000479098

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009067.1_s317c1
Derived from:
ccsbBroadEn_10020
DNA Barcode:
GGCGTATGGGAGTCACTGGATCAA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMPRSS11A (339967)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000479098
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 339967 TMPRSS11A transmembrane serine protea... NM_001114387.2 99.7% 99.7% 18G>A;869A>G;1002T>C
2 human 339967 TMPRSS11A transmembrane serine protea... NM_182606.4 99% 99% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1323
ORF length:
1254
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gatgtatcgg acagtaggat ttggcacccg aagcagaaat ctgaagccat
121ggatgattgc cgttctcatt gtgttgtccc tgacagtggt ggcagtgacc ataggtctcc
181tggttcactt cctagtattt gaccaaaaaa aggagtacta tcatggctcc tttaaaattt
241tagatccaca aatcaataac aatttcggac aaagcaacac atatcaactt aaggacttac
301gagagacgac cgaaaatttg gtggatgaga tatttataga ttcagcctgg aagaaaaatt
361atatcaagaa ccaagtagtc agactgactc cagaggaaga tggtgtgaaa gtagatgtca
421ttatggtgtt ccagttcccc tctactgaac aaagggcagt aagagagaag aaaatccaaa
481gcatcttaaa tcagaagata aggaatttaa gagccttgcc aataaatgcc tcatcagttc
541aagttaatgc aatgagctca tcaacagggg agttaactgt ccaagcaagt tgtggtaaac
601gagttgttcc attaaacgtc aacagaatag catctggagt cattgcaccc aaggcggcct
661ggccttggca agcttccctt cagtatgata acatccatca gtgtggggcc accttgatta
721gtaacacatg gcttgtcact gcagcacact gcttccagaa gtataaaaat ccacatcaat
781ggactgttag ttttggaaca aaaatcaacc ctcccttaat gaaaagaaat gtcagaagat
841ttattatcca tgagaagtac cgctctgcag caagagagta cgacattgct gttgtgcagg
901tcTCTTCCAG AGTCACCTTT TCGGATGACA TACGCCGGAT TTGTTTGCCA GAAGCCTCTG
961CATCCTTCCA ACCAAATTTG ACTGTCCACA TCACAGGATT TGGAGCACTT TACTATGGTG
1021GGGAATCCCA AAATGATCTC CGAGAAGCCA GAGTGAAAAT CATAAGTGAC GATGTCTGCA
1081AGCAACCACA GGTGTATGGC AATGATATAA AACCTGGAAT GTTCTGTGCC GGATATATGG
1141AAGGAATTTA TGATGCCTGC AGGGGTGATT CTGGGGGACC TTTAGTCACA AGGGATCTGA
1201AAGATACGTG GTATCTCATT GGAATTGTAA GCTGGGGAGA TAACTGTGGT CAAAAGGACA
1261AGCCTGGAGT CTACACACAA GTGACTTATT ACCGAAACTG GATTGCTTCA AAAACAGGCA
1321TCTTGCCAAC TTTCTTGTAC AAAGTGGTTG ATATCGGTAA GCCTATCCCT AACCCTCTCC
1381TCGGTCTCGA TTCTACGTAG TAATGAACTA GTCCGTAACT TGAAAGTATT TCGATTTCTT
1441GGCTTTATAT ATCTTGTGGA AAGGACGAGG CGTATGGGAG TCACTGGATC AAACGCGTTA
1501AGTCgacaat caacctctgg attacaaaat ttgtgaaaga tt

Download FASTA (ORF) (Full)