Construct: ORF TRCN0000479259

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006054.1_s317c1
Derived from:
ccsbBroadEn_16064
DNA Barcode:
CCCCTACTTTCGTTTCAAAGTTAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
EXOC3L4 (91828)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000479259
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 91828 EXOC3L4 exocyst complex component 3... NM_001077594.1 99.7% 99.7% (many diffs)
2 human 91828 EXOC3L4 exocyst complex component 3... XM_011537325.2 99.7% 99.7% (many diffs)
3 human 91828 EXOC3L4 exocyst complex component 3... XM_011537327.2 99.7% 99.7% (many diffs)
4 human 91828 EXOC3L4 exocyst complex component 3... XM_011537328.2 99.7% 99.7% (many diffs)
5 human 91828 EXOC3L4 exocyst complex component 3... XM_011537329.2 99.7% 99.7% (many diffs)
6 human 91828 EXOC3L4 exocyst complex component 3... XM_011537330.2 99.7% 99.7% (many diffs)
7 human 91828 EXOC3L4 exocyst complex component 3... XM_011537331.1 99.7% 99.7% (many diffs)
8 human 91828 EXOC3L4 exocyst complex component 3... XM_011537332.2 99.7% 99.7% (many diffs)
9 human 91828 EXOC3L4 exocyst complex component 3... XM_011537333.2 94.9% 94.8% (many diffs)
10 human 91828 EXOC3L4 exocyst complex component 3... XM_011537323.3 92.3% 92.3% (many diffs)
11 human 91828 EXOC3L4 exocyst complex component 3... XM_011537324.2 91.5% 91.5% (many diffs)
12 human 91828 EXOC3L4 exocyst complex component 3... XM_011537334.1 75% 74.9% (many diffs)
13 human 91828 EXOC3L4 exocyst complex component 3... XR_943558.2 65.2% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2235
ORF length:
2166
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gccatcacca cagacagaca ctcctgggcc ggagctgcag agtcccaagg
121aggctgagga gccacagact ccagctcagg gctcccggcg aacaagcagc aggaaagagc
181ccaatgccca ccgcaaggat ggcacaaggc tgggcctggg ctccctgagg caggccttct
241cccgggccag ccagcgggct ttgacccagg tctccaagga agatacgggc ctgttccggc
301gaagctcctg ctccctgttc cggtccttcc ggcaagccct gaatgacggc ccagctaccg
361gccattccca ggccactcct gaggtgccct cgggggtcat gaatggtgtc agccaacagg
421catccactgg ggcagcgtct gaggaactga aacccgaggc agaaggcaaa tccgtggccg
481acctcattac tgaacggcaa ctgctggcgg ccttcgaaca gcttctgcgc ctggagacgc
541tgctggtggc cgagaaggcc tcgcgcacct ttgagcagga ccctacggcc ttcgcgcggc
601gcgctatgga cgtgtgcctg ctttacgacg ggctggcagc cgagatcggc gccatcgtgc
661gcgagacgct ggacagcgac ggtgtggacg cggccgcgct ggccgagctg gcccgcgtgg
721tgagcgcgga ggaggaggcc cacccttctc cccccgacga cggcgacttc ctgcgcacgc
781cgcgccgctg gcgccagcac tgggaggagg cggtgcggcg aagcgctcag gagcgcgtgc
841ggcggccggg cgcggggtgg gccttcgggg aggcggaggg cgcgtcgggt ttggcccagc
901ttctggccga gctgggtggc ttggttcgcc gcgacctgca gaaggtgcgg caggaggtgc
961agcccgcgta tgcggcggcc ggcttcccag cgtgggaggt ctatctgcgt gccttccaca
1021gcgccgtggc ccagcgcctc caggagctcg cgcgcgacgc ccgcggctgc gagcagctct
1081atatcctgct ggactgggcc gccaacgtct acggcagtcc tgacttcctg ggcgccccgg
1141ggctggcgct gcccgccgag ccgctgcctc cgctcctggc gccggacgtg tgggcccgac
1201tggagagcga ctacaccagc ttcctggagg ccaagatcgc aagctgcttc gacagcatct
1261tgcagctgga gcagagtcac tgggcggccg ccgaggtccc cgaggtgctg cagggcctct
1321accaggcgcc gctgtccatg gacgtccata tgctcgtggc cgagcacgtg aaggcggccg
1381gcgccatctc cgcggagctg gaggccacca ccctgcgaat ctgcacgcgg gcgctcggcc
1441tcttcgtgcc caggtttgaa aaggcttttc tggcgtcgga ggcggtgagc gagccgcacc
1501tgggcgccta catcaacgcc tgcgaggagc tcaggaccag tcttctctcc aggttcccag
1561gaacccaaga ggagctggag aagcccctgg tgacggccac ctgcagcttc cagaagcact
1621tgcttcaggg cttgcagcgt gagttgcagc cgctcttcag ggttgtgtgc accagggact
1681ggctgacgca ggactggctg catcccctca tggacaaggt ggtgaccttc gccggtcatc
1741tccagcgtgt ggcccggccg cgggcacagg agactctgca ggaggtgcac cggttcgtgg
1801tccgcgagta cctggcgcgg gcgctgaggc cacgggagcg gttccggggc atggagcgca
1861tgcatggctc ccagaagatg agcctggatg cccaggccat cagcgacacc ttccagggcc
1921tgggttccga ggccacatgg ttggaccaag ccatccagtg cgtggctgag atcctgggcg
1981agacctacaa agatgacatc cagcggcacc tggagactct taTCCGGAGC TACCCCGACA
2041TCAGGCGGGA CCACATACTG GCCATTCTGG CGCTGCGCCG ACTGGGCCGC CGGCGGAACC
2101AGCATCTCTT GCAGCACACC GAAGACCTGC TGAGAGCTGC GGCCGGGGCG GCGGGTGCGG
2161AGGCCCCTCG GGGCCGCGTG CTCTTCGAGG AGATCAAGGT GCCCAGTGCC ATGGCTGTGC
2221TGATCACCTG CGTCTTGCCA ACTTTCTTGT ACAAAGTGGT TGATATCGGT AAGCCTATCC
2281CTAACCCTCT CCTCGGTCTC GATTCTACGT AGTAATGAAC TAGTCCGTAA CTTGAAAGTA
2341TTTCGATTTC TTGGCTTTAT ATATCTTGTG GAAAGGACGA CCCCTACTTT CGTTTCAAAG
2401TTACACGCGT TAAGTCgaca atcaacctct ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)